Factsheet for TraesCS2B01G388700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G367800.1	Wheat	cytosol, plastid	96.73	96.73
TraesCS2A01G371500.1	Wheat	plastid	96.73	88.36
TraesCS2B01G388500.1	Wheat	cytosol, mitochondrion, nucleus	45.42	87.42
OQU82017	Sorghum	extracellular	46.41	86.06
Os04t0531700-01	Rice	mitochondrion	25.16	70.64
TraesCS2B01G544800.1	Wheat	cytosol	58.17	57.79
TraesCS2B01G388600.1	Wheat	cytosol, plastid	57.52	57.52
TraesCS2B01G388300.1	Wheat	cytosol	58.17	57.05
TraesCS2B01G388200.2	Wheat	cytosol	48.04	54.44
KRH40499	Soybean	cytosol	19.28	53.64
TraesCS2B01G388100.1	Wheat	cytosol	54.25	52.7
VIT_15s0046g03550.t01	Wine grape	cytosol	50.0	51.34
KRH65113	Soybean	cytosol	50.0	51.17
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	49.35	50.84
KRH48206	Soybean	cytosol	50.65	50.82
PGSC0003DMT400000067	Potato	golgi, peroxisome	48.04	50.52
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	49.02	50.51
TraesCS1B01G437500.1	Wheat	cytosol	51.31	50.32
VIT_15s0046g03600.t01	Wine grape	cytosol	48.69	50.0
VIT_15s0046g03650.t01	Wine grape	cytosol	48.69	50.0
Solyc11g071460.1.1	Tomato	cytosol	48.69	49.83
VIT_15s0046g03570.t01	Wine grape	plastid	48.37	49.83
KRH48196	Soybean	cytosol	48.04	49.66
PGSC0003DMT400048179	Potato	cytosol	48.37	49.5
PGSC0003DMT400048181	Potato	cytosol	48.37	49.5
Bra032567.1-P	Field mustard	cytosol	18.63	48.72
KRH40500	Soybean	cytosol, nucleus	46.73	48.64
Solyc01g099560.2.1	Tomato	cytosol	28.1	48.59
KRH48198	Soybean	cytosol	45.75	48.44
KRH48194	Soybean	cytosol	47.06	48.32
Bra007585.1-P	Field mustard	cytosol	46.73	48.31
CDX71758	Canola	cytosol	46.73	48.31
CDY48937	Canola	cytosol	46.73	48.31
KRH65114	Soybean	cytosol	46.41	48.3
KRH00696	Soybean	mitochondrion	46.41	48.3
KRH00691	Soybean	cytosol	40.2	48.24
KRH17659	Soybean	cytosol	15.36	47.96
KRH48202	Soybean	cytosol	46.73	47.83
Solyc01g094210.2.1	Tomato	cytosol	46.41	47.81
Bra014448.1-P	Field mustard	cytosol	46.08	47.47
CDX89104	Canola	cytosol	42.81	47.46
VIT_06s0061g00670.t01	Wine grape	plastid	46.73	47.04
Solyc01g094220.2.1	Tomato	cytosol	46.08	47.0
PGSC0003DMT400047834	Potato	cytosol	45.75	46.82
PGSC0003DMT400088659	Potato	cytosol	17.97	46.61
AT2G24190.2	Thale cress	cytosol	45.75	46.51
CDY56927	Canola	endoplasmic reticulum, golgi	46.08	46.08
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	45.75	45.75
VIT_02s0025g04510.t01	Wine grape	cytosol	29.74	45.73
Solyc01g094270.2.1	Tomato	cytosol, plastid	47.06	45.71
Bra032573.1-P	Field mustard	cytosol	19.93	45.52
PGSC0003DMT400000078	Potato	cytosol	44.44	45.33
TraesCS2B01G116700.1	Wheat	mitochondrion	46.41	45.22
VIT_06s0061g00640.t01	Wine grape	cytosol	44.77	45.07
Solyc01g094250.2.1	Tomato	cytosol	45.75	43.89
Solyc01g094240.2.1	Tomato	cytosol	45.42	43.71
Solyc01g094260.2.1	Tomato	cytosol	45.42	43.57
CDY15148	Canola	cytosol	41.18	42.71
KRH65115	Soybean	cytosol	45.1	42.46
VIT_06s0009g01450.t01	Wine grape	plastid	34.97	42.46
CDX90062	Canola	cytosol	40.85	42.37
Bra033230.1-P	Field mustard	cytosol	40.85	42.37
AT1G01800.1	Thale cress	cytosol	40.85	42.37
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	45.1	42.2
PGSC0003DMT400026580	Potato	cytosol	42.16	41.61
Solyc10g017570.2.1	Tomato	cytosol	41.5	40.97
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	16.67	40.16
TraesCS2B01G371400.1	Wheat	peroxisome	37.25	39.04
TraesCS6B01G247400.1	Wheat	peroxisome	36.27	38.01
KRH40504	Soybean	endoplasmic reticulum	45.75	35.9
TraesCS2B01G117000.1	Wheat	plastid	44.12	35.81
Solyc11g042710.1.1	Tomato	cytosol	17.97	34.81
TraesCS3B01G477700.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome	33.66	32.09
VIT_15s0046g03530.t01	Wine grape	cytosol	22.88	20.47
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	48.04	19.78
Os04t0531750-00	Rice	mitochondrion	5.23	4.83

Protein Annotations

EnsemblPlants:TraesCS2B01G388700.1	EnsemblPlantsGene:TraesCS2B01G388700	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	ncoils:Coil
PANTHER:PTHR43490	PANTHER:PTHR43490:SF26	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	MapMan:50.1.1	:	:	:	:

Description

No Description!

Coordinates

chr2B:-:551566223..551569552

Molecular Weight (calculated)

33569.0 Da

IEP (calculated)

5.127

GRAVY (calculated)

-0.296

Length

306 amino acids

Sequence
(BLAST)

001: MEAATSNPSS KRIALVTGGN KGVGLETCRQ LASKGLKVVL TARNEARGLE AVEGVRRSGA DVVFHQLDVI DPDSVARLAD FVRDQFGKLD ILINNAGISG
101: VDRDPVLVAK VKEQVESMDV DQRVQWMKEN SKETYEEAKE CMRTNYYGAK LVTEALLPLL QLSSSGRIVN VSSGFSLLRN FNNEELKNEF NDVDNLTEKK
201: LEELLDSFLE DFKANLIEAH GWPTGGSSAY KVAKATLNAY TRILAKNYPR MRINCLTPGY VKSDMSMHMG VLTPEEGASN PVKVALLPDD GPTGAYFDRD
301: GVASFV

Best Arabidopsis Sequence Match ( AT2G24190.1 )
(BLAST)

001: MAEESPRYAI VTGGNRGIGF EICRQLANKG IRVILTSRDE KQGLEAVETL KKELEISDQS IVFHQLDVSD PVSVTSLAEF VKTHFGKLDI LINNAGVGGV
101: ITDVDALRAG TGKEGFKWEE TITETYELAE ECIKINYYGP KRMCEAFIPL LQLSDSPRII NVSSFMGQVK NLVNEWAKGI LSDAENLTEV RIDQVINQLL
201: NDLKEDTAKT KYWAKVMSAY VVSKAGLNAY TRILAKKHPE IRVNSVCPGF VKTDMNFKTG ILSVEEGASS PVRLALLPHQ ESPSGCFFDR KQVSEF

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:TAIR;Acc:AT2G24190]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.