Factsheet for TraesCS1D01G415900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G437500.1	Wheat	cytosol	95.19	95.19
HORVU1Hr1G089830.1	Barley	cytosol	92.63	92.63
TraesCS1A01G408800.1	Wheat	cytosol	94.23	86.73
EES07554	Sorghum	cytosol	71.15	72.08
Zm00001d017381_P001	Maize	cytosol, extracellular	69.55	69.11
TraesCS2D01G517700.1	Wheat	cytosol	59.62	60.39
TraesCS2D01G367200.1	Wheat	cytosol	58.97	59.55
KRH40499	Soybean	cytosol	20.19	57.27
Bra032567.1-P	Field mustard	cytosol	20.19	53.85
TraesCS2D01G367600.2	Wheat	plastid	51.92	51.59
TraesCS2D01G367700.1	Wheat	mitochondrion	50.64	51.13
TraesCS2D01G367800.1	Wheat	cytosol, plastid	50.0	50.98
VIT_15s0046g03570.t01	Wine grape	plastid	47.76	50.17
Bra032573.1-P	Field mustard	cytosol	21.15	49.25
KRH48198	Soybean	cytosol	44.87	48.44
VIT_15s0046g03550.t01	Wine grape	cytosol	46.15	48.32
VIT_15s0046g03650.t01	Wine grape	cytosol	46.15	48.32
VIT_06s0061g00670.t01	Wine grape	plastid	46.79	48.03
PGSC0003DMT400048179	Potato	cytosol	45.83	47.83
VIT_15s0046g03580.t01	Wine grape	cytosol, peroxisome, plastid	45.51	47.81
VIT_15s0046g03590.t01	Wine grape	cytosol, peroxisome, plastid	45.51	47.81
KRH48196	Soybean	cytosol	45.19	47.64
PGSC0003DMT400048181	Potato	cytosol	45.51	47.49
Solyc11g071460.1.1	Tomato	cytosol	45.51	47.49
KRH00696	Soybean	mitochondrion	44.55	47.28
PGSC0003DMT400047834	Potato	cytosol	45.19	47.16
TraesCS2D01G367400.1	Wheat	plastid	52.56	47.13
VIT_06s0061g00640.t01	Wine grape	cytosol	45.83	47.04
VIT_15s0046g03600.t01	Wine grape	cytosol	44.23	46.31
CDX71758	Canola	cytosol	43.91	46.28
KRH00691	Soybean	cytosol	37.82	46.27
KRH40500	Soybean	cytosol, nucleus	43.27	45.92
KRH65113	Soybean	cytosol	43.91	45.82
PGSC0003DMT400000067	Potato	golgi, peroxisome	42.63	45.7
KRH48194	Soybean	cytosol	43.59	45.64
Bra007585.1-P	Field mustard	cytosol	43.27	45.61
CDY48937	Canola	cytosol	43.27	45.61
KRH48206	Soybean	cytosol	44.55	45.57
KRH48202	Soybean	cytosol	43.59	45.48
CDX90062	Canola	cytosol	42.95	45.42
CDY15148	Canola	cytosol	42.95	45.42
Bra033230.1-P	Field mustard	cytosol	42.63	45.08
TraesCS2D01G099300.1	Wheat	cytosol	45.19	44.9
AT1G01800.1	Thale cress	cytosol	41.99	44.41
KRH65114	Soybean	cytosol	41.67	44.22
PGSC0003DMT400000078	Potato	cytosol	42.31	44.0
AT2G24190.2	Thale cress	cytosol	41.99	43.52
CDX89104	Canola	cytosol	38.46	43.48
Bra014448.1-P	Field mustard	cytosol	41.35	43.43
Solyc01g094220.2.1	Tomato	cytosol	41.67	43.33
Solyc01g094210.2.1	Tomato	cytosol	41.03	43.1
KRH65115	Soybean	cytosol	44.23	42.46
PGSC0003DMT400088659	Potato	cytosol	16.03	42.37
CDY56927	Canola	endoplasmic reticulum, golgi	41.03	41.83
PGSC0003DMT400048175	Potato	cytosol, peroxisome, plastid	16.99	41.73
Solyc01g099560.2.1	Tomato	cytosol	23.4	41.24
TraesCS2D01G350600.1	Wheat	peroxisome	38.46	41.1
VIT_06s0009g01450.t01	Wine grape	plastid	33.01	40.87
KRH17659	Soybean	cytosol	12.82	40.82
Solyc01g094260.2.1	Tomato	cytosol	41.67	40.75
PGSC0003DMT400000080	Potato	cytosol, mitochondrion, plastid	39.74	40.52
AT3G61220.3	Thale cress	endoplasmic reticulum, vacuole	42.31	40.37
Solyc01g094250.2.1	Tomato	cytosol	41.03	40.13
Solyc01g094270.2.1	Tomato	cytosol, plastid	40.38	40.0
Solyc01g094240.2.1	Tomato	cytosol	40.71	39.94
VIT_02s0025g04510.t01	Wine grape	cytosol	25.32	39.7
PGSC0003DMT400026580	Potato	cytosol	39.42	39.68
TraesCS6D01G200400.1	Wheat	peroxisome	36.86	39.38
TraesCS2D01G099500.1	Wheat	plastid	47.44	39.36
Solyc11g042710.1.1	Tomato	cytosol	19.87	39.24
Solyc10g017570.2.1	Tomato	cytosol	38.78	39.03
TraesCS3D01G436600.1	Wheat	cytosol	35.9	34.78
KRH40504	Soybean	endoplasmic reticulum	42.95	34.36
VIT_15s0046g03530.t01	Wine grape	cytosol	21.15	19.3
VIT_06s0061g00620.t01	Wine grape	mitochondrion, plastid	45.51	19.11

Protein Annotations

EnsemblPlants:TraesCS1D01G415900.1	EnsemblPlantsGene:TraesCS1D01G415900	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490
PANTHER:PTHR43490:SF13	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	MapMan:50.1.1	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:474921754..474923173

Molecular Weight (calculated)

33503.8 Da

IEP (calculated)

4.907

GRAVY (calculated)

-0.131

Length

312 amino acids

Sequence
(BLAST)

001: MEGSISGPSE KRVAVVTGGN RGMGLEICRQ LAAHGLTVVL TARDEKRGAE AAEKLREEGL SDVAFHQLEI SEPASAAHLA AFIKDKFGKL DILVNNAGVL
101: GVTTDVGDPA TLQETLAGKD GMERAEWLRQ RTTQTTQDAE DCLRINYHGS KIVTEALLPL LRSSSDGRIV NVTSAWGLLR YFSGDELRRE LDDVDNLTTQ
201: QLDEMLRLFL EDLGKGNGAL ERRGWPADRV YAAYMASKAL VCAYTRVLAR EEGAALRVNC VHPGYVLTGM NDYTGVLTAA EGAAAAVAVA LAEKGGVTGA
301: YFDRTELGAS FV

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.