Factsheet for Zm00001d025922_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

nucleus: 24677780

msms PMID: 24677780 doi

B Guo, Y Chen, C Li, T Wang, R Wang, B Wang, S Hu, X Du, H Xing, X Song, Y Yao, Q Sun, Z Ni

State Key Laboratory for Agrobiotechnology, Key Laboratory of Crop Heterosis and Utilization (MOE), Beijing Key Laboratory of Crop Genetic Improvement, China Agricultural University, Beijing, China; National Plant Gene Research Centre (Beijing), Beijing, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11171	Sorghum	cytosol	89.39	89.39
Zm00001d002848_P001	Maize	cytosol, plastid	74.28	72.41
Zm00001d002847_P001	Maize	cytosol	72.99	72.29
Zm00001d025923_P001	Maize	cytosol	71.38	71.38
Os04t0532100-01	Rice	cytosol	69.45	69.9
Zm00001d013022_P001	Maize	cytosol	63.02	61.25
Zm00001d025924_P001	Maize	mitochondrion	65.92	59.94
Zm00001d002845_P001	Maize	cytosol	10.29	55.17
Zm00001d051259_P001	Maize	cytosol	32.8	53.97
Zm00001d017381_P001	Maize	cytosol, extracellular	52.73	52.23
Zm00001d051251_P003	Maize	cytosol	42.12	49.62
Zm00001d051254_P001	Maize	cytosol	33.12	44.98
Zm00001d025761_P002	Maize	mitochondrion	37.62	40.07
Zm00001d003174_P001	Maize	extracellular, mitochondrion	36.33	38.44
Zm00001d007189_P003	Maize	cytosol, extracellular	20.26	37.28
Zm00001d051041_P001	Maize	peroxisome	36.01	35.44
Zm00001d042250_P001	Maize	cytosol	32.8	31.48
Zm00001d003173_P001	Maize	cytosol	35.05	28.61
Zm00001d051246_P001	Maize	peroxisome	45.02	14.51

Protein Annotations

EMBL:BT086309	EnsemblPlants:Zm00001d025922_P001	EnsemblPlants:Zm00001d025922_T001	EnsemblPlantsGene:Zm00001d025922	EntrezGene:100282122	Gene3D:3.40.50.720
InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490	PANTHER:PTHR43490:SF26	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	ProteinID:AQK45033.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0001A4C4DE	UniProt:C4J662
MapMan:50.1.1	:	:	:	:	:

Description

(+)-neomenthol dehydrogenase

Coordinates

chr10:-:133784874..133786592

Molecular Weight (calculated)

33345.7 Da

IEP (calculated)

4.896

GRAVY (calculated)

-0.036

Length

311 amino acids

Sequence
(BLAST)

001: MEGAISTSPG ARIAVVTGGN KGIGLEVCRQ LAGNGITVVL TARDETRGAA ALEELRALGL SDVVFHLLDI TDASSIARLA GFLKARFGRL DILINNAAFG
101: GVEYARGPAA AAGSVTSEEE LSGMDRDQRL EWLWRNTRET YDAAKKGLLT NYYGTKHVIE ALLPLLRASS DGRIVNVSSD FGLLRFFRNE ELKQELHNVE
201: KLTEGRLDEL LDAFLEDFEA GEADARGWPA AFAAYKVGKA AMNAYSRILA AEQPTLRVNC VHPGYIKTDI TLRSGLLTPE EGAGNVVKVA LLPGGGVTGA
301: FFEDGQEASF V

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.