Factsheet for Zm00001d013022_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93229	Sorghum	cytosol	84.06	85.67
EES17690	Sorghum	cytosol	44.06	84.43
Zm00001d002847_P001	Maize	cytosol	65.31	66.56
Os04t0532100-01	Rice	cytosol	63.44	65.7
Zm00001d025922_P001	Maize	nucleus	61.25	63.02
Zm00001d025923_P001	Maize	cytosol	60.31	62.06
Zm00001d002848_P001	Maize	cytosol, plastid	61.25	61.44
Zm00001d025924_P001	Maize	mitochondrion	57.81	54.09
Zm00001d017381_P001	Maize	cytosol, extracellular	51.56	52.55
Zm00001d051259_P001	Maize	cytosol	30.0	50.79
Zm00001d002845_P001	Maize	cytosol	8.75	48.28
Zm00001d051251_P003	Maize	cytosol	38.44	46.59
Zm00001d051254_P001	Maize	cytosol	29.38	41.05
Zm00001d025761_P002	Maize	mitochondrion	35.62	39.04
Zm00001d007189_P003	Maize	cytosol, extracellular	20.0	37.87
Zm00001d003174_P001	Maize	extracellular, mitochondrion	34.38	37.41
Zm00001d051041_P001	Maize	peroxisome	36.56	37.03
Zm00001d042250_P001	Maize	cytosol	30.31	29.94
Zm00001d003173_P001	Maize	cytosol	33.12	27.82
Zm00001d051246_P001	Maize	peroxisome	45.62	15.13

Protein Annotations

EMBL:BT037777	EnsemblPlants:Zm00001d013022_P001	EnsemblPlants:Zm00001d013022_T001	EnsemblPlantsGene:Zm00001d013022	EntrezGene:100217017	Gene3D:3.40.50.720
InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490	PANTHER:PTHR43490:SF26	PFAM:PF00106	PFAM:PF13561
PRINTS:PR00080	PRINTS:PR00081	ProteinID:AQK62155.1	SUPFAM:SSF51735	UniParc:UPI00017B6A43	UniProt:B4FKY9
MapMan:50.1.1	:	:	:	:	:

Description

(+)-neomenthol dehydrogenase

Coordinates

chr5:-:3410175..3412752

Molecular Weight (calculated)

34398.5 Da

IEP (calculated)

6.515

GRAVY (calculated)

0.097

Length

320 amino acids

Sequence
(BLAST)

001: MQCIEGSIPV SSSTRIAVVT GGNKGIGLEV CRQLAAASTS GLAVVVVLTA RDEARGAAAV GKLRGLGLSN VFFHQLDITD APSIARLADF LKSRFGKLDI
101: LVNNAGFVGL EYIQDRIDGT STTSEEFCGM DMDKRLELLL KWCLRETCDA GKECMRINYH GTKQVTRALL PLLLASDSGR IVNVSSVLGQ LRFFGSEALK
201: RELDDVASLT EERLDEVAGA FVADLEAGAV EARGWWPAGF SPAYMVSKAA LNAYSRVLAR RHPALRVNCV HPGFVRTDMT VNFGMLTPEE GGSRVVAVAL
301: LPDGGPTGAY FQERQQAPFV

Best Arabidopsis Sequence Match ( AT3G61220.1 )
(BLAST)

001: MAEETPRYAV VTGANRGIGF EICRQLASEG IRVVLTSRDE NRGLEAVETL KKELEISDQS LLFHQLDVAD PASITSLAEF VKTQFGKLDI LVNNAGIGGI
101: ITDAEALRAG AGKEGFKWDE IITETYELTE ECIKINYYGP KRMCEAFIPL LKLSDSPRIV NVSSSMGQLK NVLNEWAKGI LSDAENLTEE RIDQVINQLL
201: NDFKEGTVKE KNWAKFMSAY VVSKASLNGY TRVLAKKHPE FRVNAVCPGF VKTDMNFKTG VLSVEEGASS PVRLALLPHQ ETPSGCFFSR KQVSEF

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LNT2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.