Factsheet for Zm00001d025924_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 1
cytosol 2
plastid 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES11175	Sorghum	cytosol, plastid	76.32	87.29
Os04t0532100-01	Rice	cytosol	60.23	66.67
Zm00001d025922_P001	Maize	nucleus	59.94	65.92
Zm00001d025923_P001	Maize	cytosol	59.65	65.59
Zm00001d002847_P001	Maize	cytosol	59.36	64.65
Zm00001d002848_P001	Maize	cytosol, plastid	56.43	60.5
Zm00001d013022_P001	Maize	cytosol	54.09	57.81
Zm00001d051259_P001	Maize	cytosol	29.24	52.91
Zm00001d017381_P001	Maize	cytosol, extracellular	48.54	52.87
Zm00001d051251_P003	Maize	cytosol	37.13	48.11
Zm00001d002845_P001	Maize	cytosol	7.31	43.1
Zm00001d051254_P001	Maize	cytosol	27.78	41.48
Zm00001d025761_P002	Maize	mitochondrion	35.09	41.1
Zm00001d003174_P001	Maize	extracellular, mitochondrion	33.92	39.46
Zm00001d007189_P003	Maize	cytosol, extracellular	19.3	39.05
Zm00001d051041_P001	Maize	peroxisome	33.33	36.08
Zm00001d042250_P001	Maize	cytosol	28.36	29.94
Zm00001d003173_P001	Maize	cytosol	31.87	28.61
Zm00001d051246_P001	Maize	peroxisome	41.52	14.71

Protein Annotations

EnsemblPlants:Zm00001d025924_P001	EnsemblPlants:Zm00001d025924_T001	EnsemblPlantsGene:Zm00001d025924	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR43490
PANTHER:PTHR43490:SF19	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081	ProteinID:AQK45035.1
SEG:seg	SUPFAM:SSF51735	UniParc:UPI000843055C	UniProt:A0A1D6JAW2	MapMan:50.1.1	:

Description

(+)-neomenthol dehydrogenase

Coordinates

chr10:+:133844872..133846261

Molecular Weight (calculated)

37043.8 Da

IEP (calculated)

8.769

GRAVY (calculated)

-0.022

Length

342 amino acids

Sequence
(BLAST)

001: MAAATPSPHS ARVAVVTGGN KGIGLEVCRQ LASNGITVVL TARDEKRGAA AVEELADAGL SGVVFHQLEV TDAQSIARLA GFLKAWFGKL DILVNNAAIG
101: GVQSLPVENV GEKIKGMDAF QMAELMRKSC RETNDTAKAG VQTNYYGVKN VTEALLPLLL QASSSGGGRV VNVSSDFGLL RVSKLFRYLI IPFQIPFLSF
201: DQRQQLLLLD LKQRMQYLRN EEVKHELDDI EGLTEERLDE LLSTFLRDFE AGALKSRGWP TEFAAYKVAK AALNSYSRVL ARRHPELRVN CAHPGYVKTD
301: MTRQTGLLTP AQGAANVVKV ALLPEGGPTG AFFALGKEAP FV

Best Arabidopsis Sequence Match ( AT1G01800.1 )
(BLAST)

001: MADPRVAVVT GSNKGIGFEI CRQLANNGIT VVLTARDENK GLAAVQKLKT ENGFSDQAIS FHPLDVSNPD TIASLAAFVK TRFGKLDILV NNAGVGGANV
101: NVDVLKAQIA EAGAPTDISK IMSDTYEIVE ECVKTNYYGV KRMCEAMIPL LQSSDSPRIV SIASTMGKLE NVSNEWAKGV LSDAENLTEE KIDEVINEYL
201: KDYKEGALQV KGWPTVMSGY ILSKAAVIAL TRVLAKRHKS FIINSVCPGF VNTEINFNTG ILSVEEGAAS PVKLALVPNG DPSGLFFDRA NVSNF

Arabidopsis Description

AT1G01800 protein [Source:UniProtKB/TrEMBL;Acc:Q94K30]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.