Factsheet for Zm00001d003174_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, extracellular

Predictor Summary:

peroxisome 3
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, mitochondrion
Any Predictor:	cytosol, peroxisome
MultiLoc:	peroxisome
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

extracellular: 20408568
mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81866	Sorghum	cytosol, peroxisome, plastid	93.54	94.83
Zm00001d025761_P002	Maize	mitochondrion	92.86	93.49
TraesCS2A01G353500.1	Wheat	peroxisome	84.01	84.59
TraesCS2D01G350600.1	Wheat	peroxisome	82.99	83.56
TraesCS2B01G371400.1	Wheat	peroxisome	82.99	83.56
HORVU2Hr1G085650.1	Barley	cytosol, peroxisome	67.01	83.47
Zm00001d051041_P001	Maize	peroxisome	77.21	71.84
GSMUA_Achr8P28970_001	Banana	peroxisome	67.35	67.12
Zm00001d003173_P001	Maize	cytosol	86.73	66.93
VIT_05s0094g00770.t01	Wine grape	cytosol	58.84	58.25
KRH50192	Soybean	cytosol	58.84	57.1
KRH71272	Soybean	cytosol, mitochondrion, peroxisome	58.84	57.1
PGSC0003DMT400022011	Potato	cytosol, peroxisome, plastid	23.47	56.1
CDY05983	Canola	cytosol, peroxisome, plastid	54.42	54.79
Bra007472.1-P	Field mustard	cytosol, peroxisome, plastid	54.08	54.45
Solyc03g059190.2.1	Tomato	cytosol, peroxisome, plastid	54.42	53.87
CDX67809	Canola	peroxisome	53.74	53.56
CDX71880	Canola	peroxisome	53.06	53.42
AT3G59710.2	Thale cress	cytosol, peroxisome, plastid	56.12	51.4
Zm00001d042250_P001	Maize	cytosol	48.3	43.83
Zm00001d051259_P001	Maize	cytosol	26.53	41.27
Zm00001d002845_P001	Maize	cytosol	7.82	39.66
Zm00001d002847_P001	Maize	cytosol	40.14	37.58
Zm00001d025923_P001	Maize	cytosol	39.46	37.3
Zm00001d051251_P003	Maize	cytosol	32.65	36.36
Zm00001d025922_P001	Maize	nucleus	38.44	36.33
Zm00001d017381_P001	Maize	cytosol, extracellular	38.44	35.99
Zm00001d002848_P001	Maize	cytosol, plastid	38.1	35.11
Zm00001d013022_P001	Maize	cytosol	37.41	34.38
Zm00001d025924_P001	Maize	mitochondrion	39.46	33.92
Zm00001d051254_P001	Maize	cytosol	25.17	32.31
Zm00001d007189_P003	Maize	cytosol, extracellular	16.33	28.4
Zm00001d051246_P001	Maize	peroxisome	38.78	11.81

Protein Annotations

EnsemblPlants:Zm00001d003174_P001	EnsemblPlants:Zm00001d003174_T001	EnsemblPlantsGene:Zm00001d003174	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR43490	PANTHER:PTHR43490:SF37	PFAM:PF00106	PFAM:PF13561	PRINTS:PR00080	PRINTS:PR00081
ProteinID:AAV64194.1	ProteinID:ONM16308.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI00004C97B4	UniProt:Q5GAU6
MapMan:50.1.1	:	:	:	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein

Coordinates

chr2:+:34501885..34505176

Molecular Weight (calculated)

31563.8 Da

IEP (calculated)

8.821

GRAVY (calculated)

0.022

Length

294 amino acids

Sequence
(BLAST)

001: MDYSGTKESP PAGAWWSRET VAVVTGANRG IGHALAARLA EHGLTVVLTA RDGERGEAAA APLLARGLAV VFRRLDVSDP ASVAEFAAWI RDALGGLDIL
101: VNNAAVSFNE IDTNSVEHAE AVLRTNFYGA KMLTEALLPL FRQSSATSRI LNVSSQLGLL NKVSDPSLRA LLLDEDGLTE AGIEAMVSRF LAQVKDGTWG
201: GQGWPKVWTD YSVSKLALNA YSRLLARRLQ ARGARVSVNC FCPGFTRTGM TKGWGKRTAE EAADVAARLA LLAPAELPTG TFFKWCTPQL YSKL

Best Arabidopsis Sequence Match ( AT3G59710.3 )
(BLAST)

001: MNHLIPPLSP TNRWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF GRNLGILDIL
101: VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL QDVKSGTWEK
201: QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS KL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ55]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.