Factsheet for GSMUA_Achr7P13400_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P08850_001	Banana	nucleus	53.12	54.9
GSMUA_Achr10P...	Banana	nucleus	45.64	48.54
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	10.97	45.36
GSMUA_Achr1P05240_001	Banana	nucleus	32.42	39.88
TraesCS3D01G113300.1	Wheat	nucleus	42.64	34.76
TraesCS3B01G130000.1	Wheat	nucleus	42.14	34.49
TraesCS4A01G396300.1	Wheat	nucleus	48.38	33.16
HORVU7Hr1G021260.1	Barley	nucleus	49.88	32.84
GSMUA_Achr7P19340_001	Banana	nucleus	15.71	32.81
Os01t0185900-01	Rice	nucleus	41.4	32.74
TraesCS7D01G092500.2	Wheat	nucleus	48.13	32.66
TraesCS4A01G396400.2	Wheat	nucleus	48.63	32.45
GSMUA_Achr2P18390_001	Banana	nucleus	29.68	32.43
HORVU3Hr1G020210.2	Barley	nucleus	42.39	32.32
GSMUA_Achr3P31130_001	Banana	mitochondrion, nucleus	28.18	32.29
TraesCS7A01G096300.1	Wheat	nucleus	48.63	32.28
TraesCS7D01G092600.1	Wheat	nucleus	48.63	32.23
Os06t0146250-00	Rice	nucleus	48.38	32.12
TraesCS7A01G096500.1	Wheat	nucleus	48.63	31.91
GSMUA_Achr3P03090_001	Banana	nucleus	30.17	31.68
GSMUA_Achr10P...	Banana	nucleus	17.96	31.03
GSMUA_Achr2P05100_001	Banana	nucleus	14.46	30.53
Zm00001d045375_P001	Maize	nucleus	18.95	30.4
OQU75809	Sorghum	nucleus	46.63	29.92
Zm00001d008794_P001	Maize	nucleus	40.15	29.81
GSMUA_Achr5P16460_001	Banana	nucleus	17.46	29.79
EES02331	Sorghum	nucleus	39.9	29.2
GSMUA_Achr11P...	Banana	nucleus	30.17	28.88
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	15.96	28.7
Zm00001d039532_P001	Maize	nucleus	38.65	28.34
TraesCS7D01G092400.1	Wheat	nucleus	41.65	27.6
GSMUA_Achr11P...	Banana	nucleus	16.71	27.35
TraesCS7D01G092300.1	Wheat	nucleus	41.15	27.27
TraesCS4A01G396200.1	Wheat	nucleus	41.15	27.27
GSMUA_Achr5P16750_001	Banana	nucleus	32.92	27.16
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	18.45	25.61
GSMUA_Achr10P...	Banana	nucleus	31.67	25.6
GSMUA_Achr3P20290_001	Banana	nucleus	24.44	25.59
GSMUA_Achr10P...	Banana	nucleus	32.42	25.49
GSMUA_Achr10P...	Banana	nucleus	17.96	25.0
GSMUA_Achr2P15200_001	Banana	nucleus	32.92	24.81
GSMUA_Achr6P13630_001	Banana	nucleus	31.92	24.43
GSMUA_Achr6P02330_001	Banana	nucleus	22.44	24.39
GSMUA_Achr6P05880_001	Banana	nucleus	28.93	24.37
GSMUA_Achr7P05200_001	Banana	nucleus	16.96	24.29
GSMUA_Achr7P18820_001	Banana	nucleus	26.68	23.83
GSMUA_Achr3P13440_001	Banana	nucleus	15.96	23.27
GSMUA_Achr10P...	Banana	nucleus	27.68	23.17
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	28.18	23.16
GSMUA_Achr1P10080_001	Banana	nucleus	18.45	22.09
GSMUA_Achr5P09730_001	Banana	nucleus	31.42	17.7

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr7G13400_001	EnsemblPlants:GSMUA_Achr7P13400_001	EnsemblPlants:GSMUA_Achr7T13400_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0TH77	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI000294842B	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative Probable WRKY transcription factor 72 [Source:GMGC_GENE;Acc:GSMUA_Achr7G13400_001]

Coordinates

chr7:+:10811416..10813496

Molecular Weight (calculated)

43497.9 Da

IEP (calculated)

8.703

GRAVY (calculated)

-0.577

Length

401 amino acids

Sequence
(BLAST)

001: MVEVREENER LKMILTQITE DYRSLSDVVR REQAKKPIKN TPADDEELKE EDTGAEPWPP SKAAKSARNG DDEVSQQPLV KKARVSVRAR CDGTTMNDGC
101: QWRKYGQKIS KGNPCPRAYY RCTVAPACPV RKQVQRCQED MSILITTYEG THNHPLPISA SAMASTTAAA ASMLLSGSSA SQPAVGFPGS FSTAISQQFH
201: LPNPLISSIT SHPTITLDLT VPPSCSFQAN QFSSFSSNFT TTTPRYSSTG FNISSSDTNS LPTLGRQPHD YLYRSYLQKT TKPSTPPNQH PLTDTLAKAI
301: TSDPKFHSAL AATITSYVEA RGGKEAVGHG LEWGEQHLNS LALPFPAAPQ GNGCATSSYF NRLPGLNLNT QQGSLLLQSS LGFPSTKGAS ASPRDHNTKN
401: M

Best Arabidopsis Sequence Match ( AT5G15130.2 )
(BLAST)

001: MSEVKEENEK LKGMLERIES DYKSLKLRFF DIIQQEPSNT ATKNQNMVDH PKPTTTDLSS FDQERELVSL SLGRRSSSPS DSVPKKEEKT DAISAEVNAD
101: EELTKAGLTL GINNGNGGEP KEGLSMENRA NSGSEEAWAP GKVTGKRSSP APASGGDADG EAGQQNHVKR ARVCVRARCD TPTMNDGCQW RKYGQKIAKG
201: NPCPRAYYRC TVAPGCPVRK QVQRCADDMS ILITTYEGTH SHSLPLSATT MASTTSAAAS MLLSGSSSSP AAEMIGNNLY DNSRFNNNNK SFYSPTLHSP
301: LHPTVTLDLT APQHSSSSSS SLLSLNFNKF SNSFQRFPST SLNFSSTSST SSNPSTLNLP AIWGNGYSSY TPYPYNNVQF GTSNLGKTVQ NSQSLTETLT
401: KALTSDPSFH SVIAAAISTM VGSNGEQQIV GPRHSISNNI QQTNTTNNNK GCGGYFSSLL MSNIMASNQT GASLDQPSSQ LPPFSMFKNS SSSSSTTNFV
501: NKEEKS

Arabidopsis Description

WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.