Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G396400.2 | Wheat | nucleus | 87.56 | 89.02 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 85.11 | 85.39 |
| TraesCS4A01G396300.1 | Wheat | nucleus | 79.71 | 83.25 |
| TraesCS7A01G096300.1 | Wheat | nucleus | 79.38 | 80.3 |
| Os06t0146250-00 | Rice | nucleus | 54.34 | 54.97 |
| OQU75809 | Sorghum | nucleus | 52.21 | 51.04 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 31.91 | 48.63 |
| TraesCS4A01G396200.1 | Wheat | nucleus | 43.21 | 43.64 |
| TraesCS7A01G096200.1 | Wheat | nucleus | 16.86 | 42.56 |
| Zm00001d045375_P001 | Maize | nucleus | 16.53 | 40.4 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 27.66 | 29.39 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 11.78 | 26.57 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 14.24 | 26.28 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 14.57 | 25.43 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 13.42 | 25.08 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 12.93 | 24.38 |
| TraesCS6A01G326500.2 | Wheat | nucleus | 20.95 | 23.15 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 12.6 | 22.13 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS7A01G096500 |
| EnsemblPlants:TraesCS7A01G096500.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7A:+:59349117..59353661
Molecular Weight (calculated)
63460.9 Da
IEP (calculated)
9.535
GRAVY (calculated)
-0.468
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKGDQRQLG GHEDRLKDQM GDDHRASDGK FFRFLQNQSS AKKEAQEDKI ASTRAEMGEV RKENERLKTM LSRMVEDHRS LQKQFDVLHQ QGRGKNLAMG
101: SPEHTSSADG VKDPRFVSLR LGTSASTSRQ DMGEEIRTGT NNADGKCISL GLSSGKAIGA AGQSEMKVQP DVLTLSPGGS SEDDAATETT TTSSKVPKNP
201: RSTGGGAEAE EEVAQQPLAK KARVSVRARC DTPTMNDGCQ WRKYGQKISK GNPCPRAYYR CTIATGCPVR KQVQRCAEDM SILITTYEGA HNHPLSPSAA
301: AMASTTSAAA SMLMSGSSTS LGFPSVASSL HGLRFGLPAA TTFDPSSHLS GRPFFLPAAA GASISATPSY PTITLDLTSQ TASQQAFSLS NTNRFSSSFP
401: DSHGHSSSAG RYPSTNFSFS GSGASSLPGA TAWPAGVGSY LSYGPSSGAP YNGVGKNSFQ AALSGINGRQ QASVASLYQP AQVQQRAAQF SGGGTCTTAP
501: IVLTDTIAKA ITSDPGFHTA LAAAITSYVG KPAAGGGKGL EWGEHLGLGP SSAASTACSS PLLARSSTGA TQSGSPNGKK MSFLQPSLAL SSGSTSATAS
601: TSPVKSREHI N
101: SPEHTSSADG VKDPRFVSLR LGTSASTSRQ DMGEEIRTGT NNADGKCISL GLSSGKAIGA AGQSEMKVQP DVLTLSPGGS SEDDAATETT TTSSKVPKNP
201: RSTGGGAEAE EEVAQQPLAK KARVSVRARC DTPTMNDGCQ WRKYGQKISK GNPCPRAYYR CTIATGCPVR KQVQRCAEDM SILITTYEGA HNHPLSPSAA
301: AMASTTSAAA SMLMSGSSTS LGFPSVASSL HGLRFGLPAA TTFDPSSHLS GRPFFLPAAA GASISATPSY PTITLDLTSQ TASQQAFSLS NTNRFSSSFP
401: DSHGHSSSAG RYPSTNFSFS GSGASSLPGA TAWPAGVGSY LSYGPSSGAP YNGVGKNSFQ AALSGINGRQ QASVASLYQP AQVQQRAAQF SGGGTCTTAP
501: IVLTDTIAKA ITSDPGFHTA LAAAITSYVG KPAAGGGKGL EWGEHLGLGP SSAASTACSS PLLARSSTGA TQSGSPNGKK MSFLQPSLAL SSGSTSATAS
601: TSPVKSREHI N
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Arabidopsis Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.