Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G021260.1 | Barley | nucleus | 84.44 | 81.12 |
| TraesCS7A01G096500.1 | Wheat | nucleus | 83.25 | 79.71 |
| TraesCS7A01G096300.1 | Wheat | nucleus | 81.71 | 79.14 |
| TraesCS4A01G396400.2 | Wheat | nucleus | 80.51 | 78.37 |
| Os06t0146250-00 | Rice | nucleus | 54.19 | 52.48 |
| OQU75809 | Sorghum | nucleus | 52.65 | 49.28 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 33.16 | 48.38 |
| TraesCS4A01G396200.1 | Wheat | nucleus | 44.1 | 42.64 |
| TraesCS7A01G096200.1 | Wheat | nucleus | 16.75 | 40.5 |
| Zm00001d045375_P001 | Maize | nucleus | 15.73 | 36.8 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 27.86 | 28.35 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 14.36 | 25.38 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 11.45 | 24.72 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 13.16 | 23.55 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 14.02 | 23.43 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 12.65 | 22.84 |
| TraesCS6A01G326500.2 | Wheat | nucleus | 21.37 | 22.6 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 12.48 | 20.98 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS4A01G396300 |
| EnsemblPlants:TraesCS4A01G396300.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4A:+:671596939..671602531
Molecular Weight (calculated)
61137.9 Da
IEP (calculated)
8.537
GRAVY (calculated)
-0.443
Length
585 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKGDQRQLG GHEERLNNEI RDDHQASDGN FFKFLQNQSS SKKEAQEDKI ASTRAEMGEV RKENERLKAM LPRMVDDHRT LQKQFDVLHQ QGRGKNLAVG
101: SAEHTSLVDG VKDPRFISLR LGTSTGTSKH NYMGEEIKGN TNNPDDIAVG ARTDGGEIKV RPDVVTLSPG GSSEEEAAET TTTSVASKTE KNPRSTDSED
201: DVAQQPLAKK ARVSVRARCD TPTMNDGCQW RKYGQKISKG NPCPRAYYRC TIATGCPVRK QVQRCAEDMS ILITTYEGSH NHPLSASATA MASTTSAAAS
301: MLMSGSSTSL GFPSAASNLH GLRFGLPAAT TVDPLSQLSA RPFFLPAAAG TSISVTPSYP TITLDLTSQA ASQQAFSLSN TNRFSSSFTG SYGHSSSTGT
401: RYPSTSFSFS GSGASSLPGA TAWPAGVGPY LSYGSSPSAP YNDAGKSSFE AALSSINGRQ QGSAAFLYQP VQQRAAHVSG GSTAPTVLTD TIAKAITSDP
501: GFHTALAAAI TSYVGKPAAG CGKGLEWGEH LGLGPSSAAA AVCSSAVLAR SSSTGAAQNG SPNDRMTLQA SLALSGSTSA TASTL
101: SAEHTSLVDG VKDPRFISLR LGTSTGTSKH NYMGEEIKGN TNNPDDIAVG ARTDGGEIKV RPDVVTLSPG GSSEEEAAET TTTSVASKTE KNPRSTDSED
201: DVAQQPLAKK ARVSVRARCD TPTMNDGCQW RKYGQKISKG NPCPRAYYRC TIATGCPVRK QVQRCAEDMS ILITTYEGSH NHPLSASATA MASTTSAAAS
301: MLMSGSSTSL GFPSAASNLH GLRFGLPAAT TVDPLSQLSA RPFFLPAAAG TSISVTPSYP TITLDLTSQA ASQQAFSLSN TNRFSSSFTG SYGHSSSTGT
401: RYPSTSFSFS GSGASSLPGA TAWPAGVGPY LSYGSSPSAP YNDAGKSSFE AALSSINGRQ QGSAAFLYQP VQQRAAHVSG GSTAPTVLTD TIAKAITSDP
501: GFHTALAAAI TSYVGKPAAG CGKGLEWGEH LGLGPSSAAA AVCSSAVLAR SSSTGAAQNG SPNDRMTLQA SLALSGSTSA TASTL
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.