Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G306300.1 | Wheat | nucleus | 94.76 | 93.74 |
| TraesCS6B01G357600.1 | Wheat | nucleus | 94.21 | 93.04 |
| HORVU6Hr1G079710.2 | Barley | nucleus | 91.68 | 81.77 |
| EES05866 | Sorghum | nucleus | 61.48 | 58.82 |
| Zm00001d018203_P001 | Maize | nucleus | 58.77 | 56.13 |
| Os02t0770500-00 | Rice | nucleus | 63.65 | 54.24 |
| GSMUA_Achr3P20290_001 | Banana | nucleus | 33.27 | 48.04 |
| CDX81493 | Canola | nucleus | 24.77 | 44.19 |
| GSMUA_Achr7P18820_001 | Banana | nucleus | 35.62 | 43.88 |
| GSMUA_Achr10P... | Banana | nucleus | 36.89 | 42.59 |
| GSMUA_Achr6P02330_001 | Banana | nucleus | 28.39 | 42.55 |
| KRH42243 | Soybean | nucleus | 13.38 | 40.88 |
| CDX96044 | Canola | nucleus | 23.87 | 40.24 |
| Bra004285.1-P | Field mustard | nucleus | 23.69 | 39.94 |
| CDY01891 | Canola | nucleus | 23.69 | 39.94 |
| PGSC0003DMT400076591 | Potato | nucleus | 28.03 | 37.53 |
| AT1G68150.1 | Thale cress | nucleus | 25.32 | 37.43 |
| Solyc01g104550.2.1 | Tomato | nucleus | 30.56 | 35.58 |
| VIT_12s0055g00340.t01 | Wine grape | nucleus | 29.66 | 33.68 |
| KRH58361 | Soybean | nucleus | 29.11 | 33.2 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 11.39 | 23.25 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 24.05 | 23.13 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 12.66 | 21.6 |
| TraesCS4A01G396300.1 | Wheat | nucleus | 22.6 | 21.37 |
| TraesCS7A01G096300.1 | Wheat | nucleus | 23.33 | 21.36 |
| TraesCS4A01G396400.2 | Wheat | nucleus | 23.15 | 21.3 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 13.38 | 21.14 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 12.48 | 21.1 |
| TraesCS7A01G096500.1 | Wheat | nucleus | 23.15 | 20.95 |
| TraesCS4A01G396200.1 | Wheat | nucleus | 21.88 | 20.0 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 11.57 | 19.34 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 12.12 | 19.25 |
| TraesCS7A01G096200.1 | Wheat | nucleus | 7.78 | 17.77 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF34 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS6A01G326500 |
| EnsemblPlants:TraesCS6A01G326500.2 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr6A:-:560032254..560034458
Molecular Weight (calculated)
57774.5 Da
IEP (calculated)
4.790
GRAVY (calculated)
-0.709
Length
553 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSKRKRAD IDLERRDDDV DDGSGDHHPG EAAPRVQKEG QIKEGEAPAK EVVEVVVDRG GDGSKEEIKY GTQQGGVIEE DKQSAAAAAD NDAGDGIDDE
101: EGDGGGTGAE DKHMVEAAPG DGYGDGDHEH TAMAQDELST MQEEMEKMKE ENKMLRRVVD RTVRDYYELQ TKLAAYQKQP ADQEPKETEV FLSLGGTAPA
201: AAVAEAKSKE EQAALRPSVG SDDTDDGREG LGLSLSLRTS SYEDEARRDV VDGGAPDIVT DVGKVRGYAL LESSRMSPPA SGDLAAGGGI GSQQGVNAAN
301: RKTRVSVRVR CQGPTMNDGC QWRKYGQKVA KGNPCPRAYY RCTVAPACPV RKQVQRCQED MSILITTYEG THNHPLPVGA TAMASTATAG AGAATFMLLS
401: STTSDAAVSG GPPPASSSYL SPYLQPNSSS QYHSSASPLM SGNMGGGGAQ HLSMFGHSSG LSAQPATHLK YPWPPNPSHG GAAGLGGGKR PFWGTGGVDD
501: VRPTALPDNA GTMASDPNQF SAAIATAISN VIGKDGQATR SKEGESSNKW GGG
101: EGDGGGTGAE DKHMVEAAPG DGYGDGDHEH TAMAQDELST MQEEMEKMKE ENKMLRRVVD RTVRDYYELQ TKLAAYQKQP ADQEPKETEV FLSLGGTAPA
201: AAVAEAKSKE EQAALRPSVG SDDTDDGREG LGLSLSLRTS SYEDEARRDV VDGGAPDIVT DVGKVRGYAL LESSRMSPPA SGDLAAGGGI GSQQGVNAAN
301: RKTRVSVRVR CQGPTMNDGC QWRKYGQKVA KGNPCPRAYY RCTVAPACPV RKQVQRCQED MSILITTYEG THNHPLPVGA TAMASTATAG AGAATFMLLS
401: STTSDAAVSG GPPPASSSYL SPYLQPNSSS QYHSSASPLM SGNMGGGGAQ HLSMFGHSSG LSAQPATHLK YPWPPNPSHG GAAGLGGGKR PFWGTGGVDD
501: VRPTALPDNA GTMASDPNQF SAAIATAISN VIGKDGQATR SKEGESSNKW GGG
001: MGFDFSTSKS KAKRQKRIEV RFASPLMGID LSLKLEAEEK KKEIEGSKHS RENKEDEEHD ASGDEDEQMV KEDEDDSSSL GLRTREEENE REELLQLQIQ
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM
101: MESVKEENTR LRKLVEQTLE DYRHLEMKFP VIDKTKKMDL EMFLGVQGKR CVDITSKARK RGAERSPSME REIGLSLSLE KKQKQEESKE AVQSHHQRYN
201: SSSLDMNMPR IISSSQGNRK ARVSVRARCE TATMNDGCQW RKYGQKTAKG NPCPRAYYRC TVAPGCPVRK QVQRCLEDMS ILITTYEGTH NHPLPVGATA
301: MASTASTSPF LLLDSSDNLS HPSYYQTPQA IDSSLITYPQ NSSYNNRTIR SLNFDGPSRG DHVSSSQNRL NWMM
Arabidopsis Description
WRKY9WRKY9 [Source:UniProtKB/TrEMBL;Acc:A0A178WJS2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.