Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G092400.1 | Wheat | nucleus | 88.76 | 88.76 |
| TraesCS7A01G096200.1 | Wheat | nucleus | 34.71 | 86.78 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 84.96 | 84.96 |
| TraesCS7A01G096300.1 | Wheat | nucleus | 44.63 | 44.7 |
| TraesCS4A01G396300.1 | Wheat | nucleus | 42.64 | 44.1 |
| TraesCS4A01G396400.2 | Wheat | nucleus | 43.31 | 43.59 |
| TraesCS7A01G096500.1 | Wheat | nucleus | 43.64 | 43.21 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 43.47 | 43.19 |
| Zm00001d045375_P001 | Maize | nucleus | 17.36 | 42.0 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 27.27 | 41.15 |
| Os06t0146250-00 | Rice | nucleus | 35.7 | 35.76 |
| OQU75809 | Sorghum | nucleus | 36.86 | 35.68 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 10.58 | 23.62 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 22.31 | 23.48 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 13.39 | 23.14 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 12.23 | 22.36 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 11.9 | 22.02 |
| TraesCS6A01G326500.2 | Wheat | nucleus | 20.0 | 21.88 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 11.57 | 21.6 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 11.24 | 19.54 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS4A01G396200 |
| EnsemblPlants:TraesCS4A01G396200.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4A:+:671523277..671527175
Molecular Weight (calculated)
63859.7 Da
IEP (calculated)
9.408
GRAVY (calculated)
-0.456
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: MIREDQRQLH GHEVRLKDQM RDDHRASEGN LFKFLQNQSS TKKEAQEDKI ASTRAEMGEV KKENERLKTM LSRMVENHRS LQKQFDVLHQ QGRGKNLVVG
101: SPAHTSLSND VKEPGFFSLH LGTSASTSRP NMGEKINSGA NYPEGRDMCL ELSSGCKAVG VAGQSETKVR RDVLTLSPGG SSEEQAVETT TTSAAASKMV
201: KNPRSTGNGV EMEEEVAQQP LAKKARVSVR AMCDTPTMND GCQWRKYGQK KSKGNPCPRA YYRCTVATGC PVRKQVQRCK EDISILITTY EGAHNHHLST
301: SATAMAFTTS AAASMLMSGS STSLGFPSGA SSLRDLRFGL PAATTVDPSN QLTSRPFFLP VAGGASISAT PSYPTITLDL TSQAASQHAF SLGNSNRFSS
401: NFTGSHGHSN NTSSYPSTSF SISSFDMSSL PGATTWPSGV GSYLGYESSS GTSYNGPNKG AFEAALSSIH GRQQGSAALL YQPLHVRRRA AELGSGGTGT
501: AAPIMLTDTI AKAITSNPGF HTALAAAITS YVGKPTTGGE KGLEWGDHLG LGPSSAATGV CSSALLAQLS STVAAQNGSP NGRTTLEPSL ALSSSTSATA
601: SMSRV
101: SPAHTSLSND VKEPGFFSLH LGTSASTSRP NMGEKINSGA NYPEGRDMCL ELSSGCKAVG VAGQSETKVR RDVLTLSPGG SSEEQAVETT TTSAAASKMV
201: KNPRSTGNGV EMEEEVAQQP LAKKARVSVR AMCDTPTMND GCQWRKYGQK KSKGNPCPRA YYRCTVATGC PVRKQVQRCK EDISILITTY EGAHNHHLST
301: SATAMAFTTS AAASMLMSGS STSLGFPSGA SSLRDLRFGL PAATTVDPSN QLTSRPFFLP VAGGASISAT PSYPTITLDL TSQAASQHAF SLGNSNRFSS
401: NFTGSHGHSN NTSSYPSTSF SISSFDMSSL PGATTWPSGV GSYLGYESSS GTSYNGPNKG AFEAALSSIH GRQQGSAALL YQPLHVRRRA AELGSGGTGT
501: AAPIMLTDTI AKAITSNPGF HTALAAAITS YVGKPTTGGE KGLEWGDHLG LGPSSAATGV CSSALLAQLS STVAAQNGSP NGRTTLEPSL ALSSSTSATA
601: SMSRV
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Arabidopsis Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.