Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G092600.1 | Wheat | nucleus | 90.35 | 89.75 |
| TraesCS7A01G096500.1 | Wheat | nucleus | 89.02 | 87.56 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 86.02 | 84.89 |
| TraesCS7A01G096300.1 | Wheat | nucleus | 81.03 | 80.63 |
| TraesCS4A01G396300.1 | Wheat | nucleus | 78.37 | 80.51 |
| Os06t0146250-00 | Rice | nucleus | 55.07 | 54.8 |
| OQU75809 | Sorghum | nucleus | 52.91 | 50.88 |
| GSMUA_Achr7P13400_001 | Banana | nucleus | 32.45 | 48.63 |
| TraesCS4A01G396200.1 | Wheat | nucleus | 43.59 | 43.31 |
| TraesCS7A01G096200.1 | Wheat | nucleus | 16.47 | 40.91 |
| Zm00001d045375_P001 | Maize | nucleus | 16.81 | 40.4 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 28.45 | 29.74 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 13.81 | 25.08 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 14.48 | 24.86 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 11.15 | 24.72 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 13.14 | 24.16 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 12.81 | 23.77 |
| TraesCS6A01G326500.2 | Wheat | nucleus | 21.3 | 23.15 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 12.48 | 21.55 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 |
| PFscan:PS50811 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS4A01G396400 |
| EnsemblPlants:TraesCS4A01G396400.2 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr4A:+:671639219..671643709
Molecular Weight (calculated)
61992.9 Da
IEP (calculated)
9.411
GRAVY (calculated)
-0.451
Length
601 amino acids
Sequence
(BLAST)
(BLAST)
001: MIKGDQRQLG SHEDRLKDQD GNFFKFLQNQ SSAKKEAQED KIASTRAEMG EVRKENERLK TMLSWMVEDH RSLQKQFDVF HQQGRGKNLA VGSPEHTSPT
101: DGVKDPRFFA LGLGTSASAS TSRQNLGEEI RTGTNNPDGK GVSLGLSSGC KAVGAAGQSE MKVQPDVLTL SPGGSSEEDA ATETTTTSSK AAKNPRSTGG
201: GAEAEEEVAQ QPLAKKARVS VRARCDTPTM NDGCQWRKYG QKISKGNPCP RAYYRCTVAT GCPVRKQVQR CAEDMSILIT TYEGAHNHPL SASAAAMAST
301: TSAAASMLMS GSSTSLGFPS AASSLHGHRF GLPAASDASS SQMGGRPFFL PTATGASISA TPSYPTITLD LTSQAASQQA FSLSNSNRFS SSFSGAHGHS
401: SSAGRYPSTS FSFSGSGASN LPGFTAWPAG VGSYMSYGSS SAALYNGAGK SSFEDALSGI NGRQQASVAS LYQPAQVQQR AAQLSGGGTG TAAPIVPTDT
501: IAKAITSDPG FHTALAAAIT SYVGKPAAGG GKGLEWGEHL GLGPSSAACS SALLARSTGA APSGSPHGKK MPFLQPSLAL SGSTTSATAS TPPVKSREHT
601: N
101: DGVKDPRFFA LGLGTSASAS TSRQNLGEEI RTGTNNPDGK GVSLGLSSGC KAVGAAGQSE MKVQPDVLTL SPGGSSEEDA ATETTTTSSK AAKNPRSTGG
201: GAEAEEEVAQ QPLAKKARVS VRARCDTPTM NDGCQWRKYG QKISKGNPCP RAYYRCTVAT GCPVRKQVQR CAEDMSILIT TYEGAHNHPL SASAAAMAST
301: TSAAASMLMS GSSTSLGFPS AASSLHGHRF GLPAASDASS SQMGGRPFFL PTATGASISA TPSYPTITLD LTSQAASQQA FSLSNSNRFS SSFSGAHGHS
401: SSAGRYPSTS FSFSGSGASN LPGFTAWPAG VGSYMSYGSS SAALYNGAGK SSFEDALSGI NGRQQASVAS LYQPAQVQQR AAQLSGGGTG TAAPIVPTDT
501: IAKAITSDPG FHTALAAAIT SYVGKPAAGG GKGLEWGEHL GLGPSSAACS SALLARSTGA APSGSPHGKK MPFLQPSLAL SGSTTSATAS TPPVKSREHT
601: N
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.