Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G396200.1 | Wheat | nucleus | 86.78 | 34.71 |
| Bra025692.1-P | Field mustard | nucleus | 16.94 | 17.01 |
| TraesCS7A01G096500.1 | Wheat | nucleus | 42.56 | 16.86 |
| TraesCS4A01G396300.1 | Wheat | nucleus | 40.5 | 16.75 |
| TraesCS4A01G396400.2 | Wheat | nucleus | 40.91 | 16.47 |
| TraesCS7A01G096300.1 | Wheat | nucleus | 40.91 | 16.39 |
| KRH63398 | Soybean | nucleus | 26.45 | 12.05 |
| PGSC0003DMT400046570 | Potato | nucleus | 23.55 | 10.86 |
| KRH54509 | Soybean | nucleus | 26.86 | 10.57 |
| KRH56941 | Soybean | nucleus | 24.38 | 10.55 |
| Solyc03g113120.2.1 | Tomato | nucleus | 22.73 | 10.5 |
| KRH03442 | Soybean | nucleus | 25.21 | 10.17 |
| VIT_17s0000g05810.t01 | Wine grape | nucleus | 24.79 | 9.92 |
| AT1G18860.1 | Thale cress | nucleus | 20.66 | 9.47 |
| Bra016535.1-P | Field mustard | nucleus | 18.18 | 9.28 |
| Bra031053.1-P | Field mustard | nucleus | 17.77 | 9.15 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 11.16 | 8.33 |
| Solyc06g070990.2.1 | Tomato | nucleus | 22.31 | 8.32 |
| TraesCS6A01G326500.2 | Wheat | nucleus | 17.77 | 7.78 |
| TraesCS7A01G508800.1 | Wheat | nucleus | 10.33 | 7.65 |
| TraesCS7A01G509000.1 | Wheat | nucleus | 10.33 | 7.18 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 9.92 | 6.86 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 14.46 | 6.09 |
| CDX86714 | Canola | nucleus | 2.07 | 5.88 |
| TraesCS5A01G225600.1 | Wheat | nucleus | 7.85 | 5.74 |
| TraesCS5A01G225500.1 | Wheat | nucleus | 6.2 | 5.54 |
| CDY19255 | Canola | nucleus | 2.07 | 2.1 |
| Bra025693.1-P | Field mustard | nucleus | 2.07 | 1.74 |
| CDX86713 | Canola | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G096200.1 | EnsemblPlantsGene:TraesCS7A01G096200 | ncoils:Coil | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF37 | SEG:seg |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:59201854..59203464
Molecular Weight (calculated)
26358.8 Da
IEP (calculated)
8.890
GRAVY (calculated)
-0.997
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGDHQRQLG GHEERLKDQM RDEHRASDGN FFKFLQNQSS TKKEAQEDKI ASTRAEMGEV RKENERLKTM LSRMVEDHRS LQKQLDVLHQ QGRGKNLAVG
101: SPAHTSPSND VKEPGFASLR LGTSAGTSRQ NMGEKIKRGT NNPESRDMSL ELSPGCKAVG VAGQSETKVH RDALTLSPGG SSEEEAVETT TTSAAASKMV
201: KNPRSTGSGV EAEDEVAQQP LAKKARVSVR ARCDTPTMND GC
101: SPAHTSPSND VKEPGFASLR LGTSAGTSRQ NMGEKIKRGT NNPESRDMSL ELSPGCKAVG VAGQSETKVH RDALTLSPGG SSEEEAVETT TTSAAASKMV
201: KNPRSTGSGV EAEDEVAQQP LAKKARVSVR ARCDTPTMND GC
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Arabidopsis Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.