Factsheet for GSMUA_Achr3P31130_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol, nucleus, plastid	13.71	49.48
CDX97845	Canola	nucleus	33.14	48.13
GSMUA_Achr3P03090_001	Banana	nucleus	50.57	46.34
GSMUA_Achr5P16750_001	Banana	nucleus	57.71	41.56
GSMUA_Achr6P05880_001	Banana	nucleus	55.43	40.76
GSMUA_Achr10P...	Banana	nucleus	56.0	39.52
GSMUA_Achr2P18390_001	Banana	nucleus	41.43	39.51
VIT_10s0116g01200.t01	Wine grape	nucleus	60.29	39.44
GSMUA_Achr2P15200_001	Banana	nucleus	59.43	39.1
PGSC0003DMT400056725	Potato	nucleus	53.43	37.7
GSMUA_Achr10P...	Banana	nucleus	54.86	37.65
GSMUA_Achr6P13630_001	Banana	nucleus	56.29	37.6
Solyc02g032950.2.1	Tomato	nucleus	53.43	37.55
KRH02033	Soybean	nucleus	52.29	37.42
KRH36485	Soybean	nucleus	57.71	37.34
KRH51128	Soybean	nucleus, plastid	54.29	36.75
GSMUA_Achr7P19340_001	Banana	nucleus	20.0	36.46
Solyc02g080890.2.1	Tomato	nucleus	57.14	36.36
CDX82900	Canola	nucleus	53.43	35.89
PGSC0003DMT400042400	Potato	nucleus	56.57	35.8
KRH11472	Soybean	nucleus	56.86	35.73
VIT_12s0059g00880.t01	Wine grape	nucleus	60.0	35.41
GSMUA_Achr10P...	Banana	nucleus	23.43	35.34
Bra013584.1-P	Field mustard	nucleus	54.0	35.13
CDX94553	Canola	nucleus	49.14	35.03
CDY16669	Canola	nucleus	49.14	34.96
AT4G22070.1	Thale cress	nucleus	53.71	34.94
AT4G04450.1	Thale cress	nucleus	52.57	34.85
PGSC0003DMT400038852	Potato	nucleus	55.14	34.65
CDX90863	Canola	nucleus	50.0	34.52
CDY21301	Canola	nucleus	50.0	34.52
GSMUA_Achr11P...	Banana	nucleus	41.14	34.37
Bra029491.1-P	Field mustard	nucleus	48.0	34.15
Bra027057.1-P	Field mustard	nucleus	53.71	34.06
Bra000793.1-P	Field mustard	nucleus	50.29	33.91
CDY19535	Canola	nucleus	53.43	33.88
CDY12937	Canola	nucleus	53.43	33.88
AT1G62300.1	Thale cress	nucleus	53.14	33.63
GSMUA_Achr6P07620_001	Banana	nucleus, plastid	46.29	33.2
KRH22585	Soybean	nucleus	56.0	31.92
CDY24892	Canola	nucleus	47.71	31.87
GSMUA_Achr2P05100_001	Banana	nucleus	17.14	31.58
Solyc07g051840.2.1	Tomato	nucleus	56.57	31.38
CDY08634	Canola	nucleus	44.86	31.21
Bra034482.1-P	Field mustard	nucleus	45.14	31.16
GSMUA_Achr7P08850_001	Banana	nucleus	34.29	30.93
KRH25355	Soybean	nucleus	53.71	30.62
GSMUA_Achr10P...	Banana	nucleus	32.86	30.5
GSMUA_Achr5P16460_001	Banana	nucleus	20.29	30.21
GSMUA_Achr11P...	Banana	nucleus	21.14	30.2
KRH56160	Soybean	nucleus	52.86	29.46
GSMUA_Achr1P05240_001	Banana	nucleus	26.86	28.83
GSMUA_Achr4P01930_001	Banana	extracellular, golgi	23.71	28.72
GSMUA_Achr7P13400_001	Banana	nucleus	32.29	28.18
GSMUA_Achr7P05200_001	Banana	nucleus	22.0	27.5
GSMUA_Achr10P...	Banana	nucleus	22.57	27.43
GSMUA_Achr7P16090_001	Banana	endoplasmic reticulum, nucleus, plastid	17.43	27.35
GSMUA_Achr3P13440_001	Banana	nucleus	21.14	26.91
GSMUA_Achr3P20290_001	Banana	nucleus	29.14	26.63
GSMUA_Achr6P02330_001	Banana	nucleus	26.29	24.93
GSMUA_Achr7P18820_001	Banana	nucleus	31.71	24.72
GSMUA_Achr1P10080_001	Banana	nucleus	23.14	24.18
GSMUA_Achr10P...	Banana	nucleus	30.57	22.34
GSMUA_Achr5P09730_001	Banana	nucleus	30.86	15.17

Protein Annotations

MapMan:15.5.22	Gene3D:2.20.25.80	ncoils:Coil	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0043565	EnsemblPlantsGene:GSMUA_Achr3G31130_001	EnsemblPlants:GSMUA_Achr3P31130_001	EnsemblPlants:GSMUA_Achr3T31130_001	InterPro:IPR003657
InterPro:IPR036576	UniProt:M0SJC7	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF31
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI0002951C24	InterPro:WRKY_dom	InterPro:WRKY_dom_sf	SEG:seg

Description

Putative WRKY transcription factor 6 [Source:GMGC_GENE;Acc:GSMUA_Achr3G31130_001]

Coordinates

chr3:-:29575502..29578696

Molecular Weight (calculated)

37543.9 Da

IEP (calculated)

9.225

GRAVY (calculated)

-0.612

Length

350 amino acids

Sequence
(BLAST)

001: MAAVRSRPGS SHYSRFKHVE AMQAELARTN EENRRLKNML SDATNNYNAL HVHLIRLMQQ RNLSDGNTQF HEADERREEG DEEGGAVVPL QFIDLRPASV
101: VDEESHSITD EGTRRRRSSS PADQPPSKSS EQEHEASTRK ARVSVRARSS APMIGDGCHW RKYGQKMAKG NPCPRAYYRC TMAAGCPVRK QVQRCAEDRS
201: VLITNYEGTH NHPLPPAAMA MASTTSAAAA MLLSGSTSSS EGVTNPSNPL ARAIMPSSSG VVTVSASAPF PTVTLDLTRT SGPLPASSST RVFGQPPHNQ
301: SKPQSVADTV SVATAAMVAD PNFTAALAAA ISSMMGRKGD GGTHQTSDSK

Best Arabidopsis Sequence Match ( AT1G62300.1 )
(BLAST)

001: MDRGWSGLTL DSSSLDLLNP NRISHKNHRR FSNPLAMSRI DEEDDQKTRI STNGSEFRFP VSLSGIRDRE DEDFSSGVAG DNDREVPGEV DFFSDKKSRV
101: CREDDEGFRV KKEEQDDRTD VNTGLNLRTT GNTKSDESMI DDGESSEMED KRAKNELVKL QDELKKMTMD NQKLRELLTQ VSNSYTSLQM HLVSLMQQQQ
201: QQNNKVIEAA EKPEETIVPR QFIDLGPTRA VGEAEDVSNS SSEDRTRSGG SSAAERRSNG KRLGREESPE TESNKIQKVN STTPTTFDQT AEATMRKARV
301: SVRARSEAPM ISDGCQWRKY GQKMAKGNPC PRAYYRCTMA TGCPVRKQVQ RCAEDRSILI TTYEGNHNHP LPPAAVAMAS TTTAAANMLL SGSMSSHDGM
401: MNPTNLLARA VLPCSTSMAT ISASAPFPTV TLDLTHSPPP PNGSNPSSSA ATNNNHNSLM QRPQQQQQQM TNLPPGMLPH VIGQALYNQS KFSGLQFSGG
501: SPSTAAFSQS HAVADTITAL TADPNFTAAL AAVISSMING TNHHDGEGNN KNQ

Arabidopsis Description

WRKY6Uncharacterized protein At1g62300 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV11]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.