Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90863 | Canola | nucleus | 98.03 | 98.03 |
| Bra000793.1-P | Field mustard | nucleus | 98.22 | 95.95 |
| CDY16669 | Canola | nucleus | 80.87 | 83.33 |
| CDX94553 | Canola | nucleus | 80.08 | 82.69 |
| AT4G04450.1 | Thale cress | nucleus | 81.66 | 78.41 |
| CDX97845 | Canola | nucleus | 33.92 | 71.37 |
| CDX86714 | Canola | nucleus | 11.64 | 69.41 |
| CDX82900 | Canola | nucleus | 69.82 | 67.95 |
| VIT_10s0116g01200.t01 | Wine grape | nucleus | 53.85 | 51.03 |
| GSMUA_Achr3P31130_001 | Banana | mitochondrion, nucleus | 34.52 | 50.0 |
| GSMUA_Achr5P16750_001 | Banana | nucleus | 47.73 | 49.79 |
| Solyc02g032950.2.1 | Tomato | nucleus | 48.52 | 49.4 |
| PGSC0003DMT400056725 | Potato | nucleus | 48.32 | 49.4 |
| KRH36485 | Soybean | nucleus | 52.07 | 48.8 |
| KRH02033 | Soybean | nucleus | 46.94 | 48.67 |
| Solyc02g080890.2.1 | Tomato | nucleus | 52.27 | 48.18 |
| GSMUA_Achr3P03090_001 | Banana | nucleus | 36.29 | 48.17 |
| PGSC0003DMT400042400 | Potato | nucleus | 52.27 | 47.92 |
| KRH11472 | Soybean | nucleus | 52.07 | 47.4 |
| CDY19535 | Canola | nucleus | 51.48 | 47.28 |
| CDY12937 | Canola | nucleus | 51.08 | 46.92 |
| KRH51128 | Soybean | nucleus, plastid | 46.94 | 46.03 |
| GSMUA_Achr10P... | Banana | nucleus | 44.77 | 45.77 |
| GSMUA_Achr6P05880_001 | Banana | nucleus | 41.62 | 44.33 |
| GSMUA_Achr6P13630_001 | Banana | nucleus | 45.76 | 44.27 |
| GSMUA_Achr2P15200_001 | Banana | nucleus | 46.35 | 44.17 |
| GSMUA_Achr10P... | Banana | nucleus | 44.38 | 44.12 |
| CDY24892 | Canola | nucleus | 44.97 | 43.51 |
| CDY08634 | Canola | nucleus | 41.62 | 41.95 |
| GSMUA_Achr6P07620_001 | Banana | nucleus, plastid | 36.88 | 38.32 |
| TraesCS3B01G199000.2 | Wheat | nucleus | 38.86 | 33.97 |
| TraesCS3A01G167200.1 | Wheat | nucleus | 38.46 | 33.91 |
| CDY22006 | Canola | nucleus | 32.54 | 33.67 |
| Zm00001d039245_P001 | Maize | nucleus | 35.7 | 33.46 |
| CDY07121 | Canola | nucleus | 32.54 | 33.33 |
| EES02155 | Sorghum | nucleus | 36.69 | 32.63 |
| CDY22299 | Canola | nucleus | 18.15 | 31.72 |
| CDY67287 | Canola | nucleus | 18.15 | 31.72 |
| CDX81493 | Canola | nucleus | 19.33 | 31.61 |
| CDX88573 | Canola | nucleus | 18.54 | 31.23 |
| HORVU3Hr1G033740.2 | Barley | nucleus, plastid | 38.66 | 31.16 |
| TraesCS3D01G173300.2 | Wheat | plastid | 38.66 | 30.82 |
| CDX87347 | Canola | nucleus | 18.15 | 30.67 |
| CDY26717 | Canola | nucleus | 17.36 | 30.66 |
| CDX79347 | Canola | nucleus | 17.75 | 30.2 |
| CDY68857 | Canola | nucleus | 21.89 | 30.0 |
| CDX67971 | Canola | nucleus | 17.36 | 29.63 |
| CDX81900 | Canola | nucleus | 30.18 | 29.48 |
| CDY21693 | Canola | nucleus | 29.98 | 29.29 |
| CDY56082 | Canola | nucleus | 22.09 | 29.24 |
| CDX96692 | Canola | nucleus | 29.59 | 29.01 |
| CDY11652 | Canola | nucleus | 21.89 | 28.98 |
| CDX75196 | Canola | nucleus | 16.17 | 28.98 |
| CDX83804 | Canola | nucleus | 29.19 | 28.74 |
| CDX96044 | Canola | nucleus | 18.54 | 28.66 |
| CDX72327 | Canola | nucleus | 15.98 | 28.42 |
| CDY01891 | Canola | nucleus | 18.34 | 28.35 |
| CDY39879 | Canola | nucleus | 16.57 | 27.36 |
| CDX68787 | Canola | nucleus | 16.77 | 26.65 |
| CDX69548 | Canola | nucleus | 22.09 | 25.93 |
| CDY63770 | Canola | nucleus | 26.04 | 25.68 |
| CDX70593 | Canola | nucleus | 25.44 | 24.52 |
| CDX78611 | Canola | nucleus | 25.44 | 24.48 |
| CDY19255 | Canola | nucleus | 11.24 | 23.95 |
| CDX85052 | Canola | nucleus | 25.84 | 23.82 |
| CDY70096 | Canola | nucleus | 16.17 | 23.77 |
| CDX69549 | Canola | nucleus | 25.64 | 23.59 |
| CDY28692 | Canola | nucleus | 24.65 | 23.23 |
| CDX85563 | Canola | nucleus | 14.0 | 22.9 |
| CDX86713 | Canola | nucleus | 4.73 | 20.34 |
| Os01t0246700-01 | Rice | nucleus | 15.19 | 18.64 |
| CDY72612 | Canola | nucleus | 8.48 | 17.84 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078G7B7 | UniProt:A0A078G7B7 | EnsemblPlants:CDY21301 | ProteinID:CDY21301 |
| ProteinID:CDY21301.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00015633001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF31 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EED6D0 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC03g29850DBnaC03g29850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G7B7]
Coordinates
chrLK032119:+:361785..364626
Molecular Weight (calculated)
55750.2 Da
IEP (calculated)
6.995
GRAVY (calculated)
-0.730
Length
507 amino acids
Sequence
(BLAST)
(BLAST)
001: MFRFPVSLGG PHDNPKQPQS SDEQPHRAMM NEVDFFRSEK RDDENIITDE TNRVHVKREN SRVVDDDDRS TGINTGLNLL TAHTGSDESM VDDGLSVDME
101: EKRSKIENVQ LREELKKAAE EIQRLKEMLS QTTNNFNSLQ MQLVAVMRQQ EDHHHLAMTG SKDIANKRHE GSEMVPRQFI ELGLPTAEVS SEERTTVRSR
201: SPPSLLENSS SRQRGKRLLE REESPETQSN GWGNPNKVSK HNASSSNDNV SAIDQSTAEA TMRKARVSVR ARSEAPTLSD GCHWRKYGQK MAKGNPCPRA
301: YFRCTMAVGC PVRKQVQRCA EERSILITTY EGNHNHPLPP AAMYMASTTT AAASMLLSGS TMSSQDGLMN PTNLFARTML PCSSSMATIS ASAPFPTITL
401: DLTESASNFP QRSGFTELNQ SGLPQMMGQA LYYNQQQSKF SGLQIPTQSL NAGESVSAAT AAIAANPNFA AALAAALTSI INGPNNHKNG DSNNGNNNVR
501: TSSVERQ
101: EKRSKIENVQ LREELKKAAE EIQRLKEMLS QTTNNFNSLQ MQLVAVMRQQ EDHHHLAMTG SKDIANKRHE GSEMVPRQFI ELGLPTAEVS SEERTTVRSR
201: SPPSLLENSS SRQRGKRLLE REESPETQSN GWGNPNKVSK HNASSSNDNV SAIDQSTAEA TMRKARVSVR ARSEAPTLSD GCHWRKYGQK MAKGNPCPRA
301: YFRCTMAVGC PVRKQVQRCA EERSILITTY EGNHNHPLPP AAMYMASTTT AAASMLLSGS TMSSQDGLMN PTNLFARTML PCSSSMATIS ASAPFPTITL
401: DLTESASNFP QRSGFTELNQ SGLPQMMGQA LYYNQQQSKF SGLQIPTQSL NAGESVSAAT AAIAANPNFA AALAAALTSI INGPNNHKNG DSNNGNNNVR
501: TSSVERQ
001: MFRFPVSLGG GPRENLKPSD EQHQRAVVNE VDFFRSAEKR DRVSREEQNI IADETHRVHV KRENSRVDDH DDRSTDHINI GLNLLTANTG SDESMVDDGL
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
101: SVDMEEKRTK CENAQLREEL KKASEDNQRL KQMLSQTTNN FNSLQMQLVA VMRQQEDHHH LATTENNDNV KNRHEVPEMV PRQFIDLGPH SDEVSSEERT
201: TVRSGSPPSL LEKSSSRQNG KRVLVREESP ETESNGWRNP NKVPKHHASS SICGGNGSEN ASSKVIEQAA AEATMRKARV SVRARSEAPM LSDGCQWRKY
301: GQKMAKGNPC PRAYYRCTMA VGCPVRKQVQ RCAEDRTILI TTYEGNHNHP LPPAAMNMAS TTTAAASMLL SGSTMSNQDG LMNPTNLLAR TILPCSSSMA
401: TISASAPFPT ITLDLTESPN GNNPTNNPLM QFSQRSGLVE LNQSVLPHMM GQALYYNQQS KFSGLHMPSQ PLNAGESVSA ATAAIASNPN FAAALAAAIT
501: SIINGSNNQQ NGNNNNSNVT TSNVDNRQ
Arabidopsis Description
WRKY42WRKY transcription factor 42 [Source:UniProtKB/Swiss-Prot;Acc:Q9XEC3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.