Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86714 | Canola | nucleus | 16.67 | 84.71 |
| Bra008719.1-P | Field mustard | nucleus | 99.07 | 77.68 |
| CDX69549 | Canola | nucleus | 98.84 | 77.5 |
| CDX85052 | Canola | nucleus | 97.69 | 76.73 |
| CDX78611 | Canola | nucleus | 81.25 | 66.6 |
| CDX70593 | Canola | nucleus | 80.56 | 66.16 |
| AT5G15130.1 | Thale cress | nucleus | 83.8 | 66.06 |
| CDY63770 | Canola | nucleus | 76.39 | 64.2 |
| CDY28692 | Canola | nucleus | 61.57 | 49.44 |
| CDX85563 | Canola | nucleus | 28.94 | 40.32 |
| CDY26717 | Canola | nucleus | 26.62 | 40.07 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 28.7 | 38.04 |
| VIT_14s0108g00120.t01 | Wine grape | nucleus | 43.52 | 37.45 |
| CDX97845 | Canola | nucleus | 20.37 | 36.51 |
| Solyc02g067430.2.1 | Tomato | nucleus | 35.42 | 34.77 |
| PGSC0003DMT400017859 | Potato | nucleus | 35.65 | 34.76 |
| KRG93506 | Soybean | nucleus | 37.5 | 33.06 |
| Zm00001d045375_P001 | Maize | nucleus | 18.52 | 32.0 |
| KRH40121 | Soybean | nucleus | 40.05 | 31.98 |
| KRH01137 | Soybean | nucleus | 40.05 | 31.98 |
| CDX81900 | Canola | nucleus | 35.42 | 29.48 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 33.56 | 29.47 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 33.33 | 29.39 |
| CDY21693 | Canola | nucleus | 35.19 | 29.29 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 40.97 | 29.26 |
| CDY11652 | Canola | nucleus | 25.93 | 29.24 |
| CDX83804 | Canola | nucleus | 34.72 | 29.13 |
| CDX81493 | Canola | nucleus | 20.83 | 29.03 |
| CDX96692 | Canola | nucleus | 34.72 | 29.01 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 40.51 | 28.93 |
| CDY68857 | Canola | nucleus | 24.54 | 28.65 |
| CDY56082 | Canola | nucleus | 25.0 | 28.2 |
| Os06t0146250-00 | Rice | nucleus | 39.35 | 28.15 |
| Os01t0185900-01 | Rice | nucleus | 32.87 | 28.01 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 33.33 | 27.38 |
| CDY01891 | Canola | nucleus | 20.6 | 27.13 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 37.73 | 26.94 |
| CDX96044 | Canola | nucleus | 20.37 | 26.83 |
| OQU75809 | Sorghum | nucleus | 38.66 | 26.72 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 37.27 | 26.44 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 35.88 | 26.23 |
| CDY19255 | Canola | nucleus | 14.12 | 25.63 |
| CDX72327 | Canola | nucleus | 16.67 | 25.26 |
| Zm00001d008794_P001 | Maize | nucleus | 31.25 | 25.0 |
| CDY22006 | Canola | nucleus | 27.55 | 24.29 |
| CDY07121 | Canola | nucleus | 27.55 | 24.04 |
| CDX75196 | Canola | nucleus | 15.74 | 24.03 |
| CDY16669 | Canola | nucleus | 27.08 | 23.78 |
| EES02331 | Sorghum | nucleus | 30.09 | 23.72 |
| CDY67287 | Canola | nucleus | 15.74 | 23.45 |
| CDY22299 | Canola | nucleus | 15.74 | 23.45 |
| CDX94553 | Canola | nucleus | 26.62 | 23.42 |
| Zm00001d039532_P001 | Maize | nucleus | 29.4 | 23.22 |
| CDX68787 | Canola | nucleus | 16.67 | 22.57 |
| CDY39879 | Canola | nucleus | 15.97 | 22.48 |
| CDX82900 | Canola | nucleus | 26.85 | 22.26 |
| CDX67971 | Canola | nucleus | 15.28 | 22.22 |
| CDY21301 | Canola | nucleus | 25.93 | 22.09 |
| CDX90863 | Canola | nucleus | 25.93 | 22.09 |
| CDX87347 | Canola | nucleus | 15.28 | 22.0 |
| CDX88573 | Canola | nucleus | 15.28 | 21.93 |
| CDX79347 | Canola | nucleus | 15.05 | 21.81 |
| CDY12937 | Canola | nucleus | 26.85 | 21.01 |
| CDY70096 | Canola | nucleus | 16.67 | 20.87 |
| CDY19535 | Canola | nucleus | 26.62 | 20.83 |
| CDY24892 | Canola | nucleus | 23.61 | 19.47 |
| CDY08634 | Canola | nucleus | 21.06 | 18.09 |
| CDX86713 | Canola | nucleus | 4.86 | 17.8 |
| CDY72612 | Canola | nucleus | 6.71 | 12.03 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078C3G5 | EnsemblPlants:CDX69548 | ProteinID:CDX69548 | ProteinID:CDX69548.1 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0006139 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 |
| EnsemblPlantsGene:GSBRNA2T00135551001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 | PANTHER:PTHR31429 |
| PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EF0531 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf |
| SEG:seg | : | : | : | : | : |
Description
BnaA10g18970D
Coordinates
chrLK031790:-:745079..747327
Molecular Weight (calculated)
46114.0 Da
IEP (calculated)
8.052
GRAVY (calculated)
-0.666
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MREVDNSSKK EEKTDATSKK VNDDEELTKA GLTLGFNSGN GPDPSVANPA NSSLENNLED APGETWPPTK VTGKRSSPAP ASGGDVDGEG GQQNPVKRAR
101: VCVRARCDTP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTV APGCPVRTQV QRCAEDMSIL ITTYEGTHSH PLPLSATTMA STTSAAASML LSGSSLSSAA
201: EMIGNNLYDN SRFINNNSNK SFYSPTLHSP LHPTVTLDLT APQHSSSSLP SLNFNKFPNS FQRFPSTSLN FSSNSSSSNS SLLNQPATWG NGYSSYTPYP
301: YNNVQFGTSN QVKTVQNNQS LTETLTKALT SDPSFHSVIA AAISSMVGSN GEQQMVGPRH PTSDSVQRTA ATENNKGRGG YFSSLLMSNI IANNQTGASL
401: DQPSSQLTSL SMFNNSSSSS STTSFVNKEE KS
101: VCVRARCDTP TMNDGCQWRK YGQKIAKGNP CPRAYYRCTV APGCPVRTQV QRCAEDMSIL ITTYEGTHSH PLPLSATTMA STTSAAASML LSGSSLSSAA
201: EMIGNNLYDN SRFINNNSNK SFYSPTLHSP LHPTVTLDLT APQHSSSSLP SLNFNKFPNS FQRFPSTSLN FSSNSSSSNS SLLNQPATWG NGYSSYTPYP
301: YNNVQFGTSN QVKTVQNNQS LTETLTKALT SDPSFHSVIA AAISSMVGSN GEQQMVGPRH PTSDSVQRTA ATENNKGRGG YFSSLLMSNI IANNQTGASL
401: DQPSSQLTSL SMFNNSSSSS STTSFVNKEE KS
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.