Factsheet for VIT_14s0108g00120.t01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_01s0026g01730.t01	Wine grape	nucleus	56.37	47.64
GSMUA_Achr1P05240_001	Banana	nucleus	29.28	45.09
VIT_17s0000g05810.t01	Wine grape	nucleus	53.19	44.13
CDX69548	Canola	nucleus	37.45	43.52
Bra006283.1-P	Field mustard	nucleus	45.02	42.88
CDX70593	Canola	nucleus	44.82	42.78
CDX78611	Canola	nucleus	44.82	42.69
KRH01137	Soybean	nucleus	45.42	42.14
Solyc02g067430.2.1	Tomato	nucleus	36.85	42.05
KRG93506	Soybean	nucleus	41.04	42.04
PGSC0003DMT400017859	Potato	nucleus	36.85	41.76
CDY63770	Canola	nucleus	42.63	41.63
KRH40121	Soybean	nucleus	44.62	41.4
Bra023505.1-P	Field mustard	nucleus	42.23	41.09
AT5G15130.1	Thale cress	nucleus	44.82	41.06
Zm00001d045375_P001	Maize	nucleus	20.12	40.4
CDX85052	Canola	nucleus	44.02	40.18
CDX69549	Canola	nucleus	44.02	40.11
Bra008719.1-P	Field mustard	nucleus	43.82	39.93
Os06t0146250-00	Rice	nucleus	46.02	38.24
CDY28692	Canola	nucleus	40.44	37.73
Bra040505.1-P	Field mustard	nucleus	40.04	37.57
OQU75809	Sorghum	nucleus	46.41	37.28
CDX85563	Canola	nucleus	22.91	37.1
TraesCS3D01G113300.1	Wheat	nucleus	36.06	36.79
TraesCS7D01G092500.2	Wheat	nucleus	43.03	36.55
TraesCS3B01G130000.1	Wheat	nucleus	35.66	36.53
TraesCS7D01G092600.1	Wheat	nucleus	44.02	36.53
HORVU7Hr1G021260.1	Barley	nucleus	44.02	36.29
Os01t0185900-01	Rice	nucleus	36.06	35.7
HORVU3Hr1G020210.2	Barley	nucleus	35.86	34.22
Zm00001d008794_P001	Maize	nucleus	35.46	32.96
Zm00001d039532_P001	Maize	nucleus	35.46	32.54
EES02331	Sorghum	nucleus	35.46	32.48
TraesCS7D01G092400.1	Wheat	nucleus	38.84	32.23
TraesCS7D01G092300.1	Wheat	nucleus	38.25	31.74
VIT_04s0008g05750.t01	Wine grape	nucleus	15.34	29.5
VIT_07s0005g02570.t01	Wine grape	nucleus	29.68	29.45
VIT_12s0055g00340.t01	Wine grape	nucleus	28.09	28.95
VIT_10s0116g01200.t01	Wine grape	nucleus	30.68	28.79
VIT_09s0018g00240.t01	Wine grape	nucleus	16.93	27.33
VIT_12s0059g00880.t01	Wine grape	nucleus	30.88	26.14
VIT_04s0008g05760.t01	Wine grape	nucleus	15.74	24.92
VIT_19s0090g00840.t01	Wine grape	nucleus	26.49	24.14

Protein Annotations

EntrezGene:100255935	wikigene:100255935	MapMan:15.5.22	Gene3D:2.20.25.80	ProteinID:CBI22167	ProteinID:CBI22167.3
ncoils:Coil	UniProt:D7SX70	EMBL:FN595239	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003700	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0043565	InterPro:IPR003657	InterPro:IPR036576
EntrezGene:LOC100255935	wikigene:LOC100255935	PFAM:PF03106	PFscan:PS50811	PANTHER:PTHR31429	PANTHER:PTHR31429:SF24
SMART:SM00774	SUPFAM:SSF118290	UniParc:UPI00015C9BB5	ArrayExpress:VIT_14s0108g00120	EnsemblPlantsGene:VIT_14s0108g00120	EnsemblPlants:VIT_14s0108g00120.t01
InterPro:WRKY_dom	InterPro:WRKY_dom_sf	RefSeq:XP_002277221	RefSeq:XP_002277221.2	SEG:seg	:

Description

No Description!

Coordinates

chr14:+:28924779..28926499

Molecular Weight (calculated)

53919.8 Da

IEP (calculated)

6.922

GRAVY (calculated)

-0.582

Length

502 amino acids

Sequence
(BLAST)

001: MGEVREENER LKTMLEKIGK DYKSLQLQVF DILQQESSKR PVDSAPAIDE ESKELELVSL CLGRSSPTDG KRDGKSSIAS KAKEDDDELN AGLTLGLDSK
101: FQVSKLDVTE FASNSSPTEN SIEEVKEEEA GETWPPSKVL KTMRTGDEVS QQSHVKRARV SVRARCDTLT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA
201: PSCPVRKQVQ RCAEDMSILI TTYEGTHNHP LPMSATAMAS TTSAAASMLI SGSSASQPGL GSSPAATELH GLNFSLPDNM RTRQLYAANS SPFPTITLDL
301: TTTASSSSHF SRFSSSFNSS TPRFPSTSLS FSSSESNSVP TVWGNGCLNY GILPHNKAQI GSLNLGRQPP EHFHQPYMEK NGQAPIQQSL TETLTKVITS
401: DPSFRTVIAA ALSSMVSSST GQPNPGAGES LGQNLKWGET TQAISTNPLS QNGKGCAPGY LNASSSSNSQ TGNSILLQPP FPVSIPRSGT SGSAAENRDQ
501: NN

Best Arabidopsis Sequence Match ( AT5G15130.1 )
(BLAST)

001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS

Arabidopsis Description

WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.