Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX69548 | Canola | nucleus | 76.73 | 97.69 |
| CDX69549 | Canola | nucleus | 97.64 | 97.46 |
| Bra008719.1-P | Field mustard | nucleus | 97.45 | 97.28 |
| CDX78611 | Canola | nucleus | 81.45 | 85.01 |
| CDX70593 | Canola | nucleus | 81.09 | 84.79 |
| CDX86714 | Canola | nucleus | 13.09 | 84.71 |
| AT5G15130.1 | Thale cress | nucleus | 83.09 | 83.39 |
| CDY63770 | Canola | nucleus | 76.0 | 81.32 |
| CDX85563 | Canola | nucleus | 38.73 | 68.71 |
| CDY28692 | Canola | nucleus | 60.0 | 61.34 |
| VIT_14s0108g00120.t01 | Wine grape | nucleus | 40.18 | 44.02 |
| GSMUA_Achr1P05240_001 | Banana | nucleus | 25.45 | 42.94 |
| Solyc02g067430.2.1 | Tomato | nucleus | 34.18 | 42.73 |
| PGSC0003DMT400017859 | Potato | nucleus | 34.18 | 42.44 |
| Zm00001d045375_P001 | Maize | nucleus | 19.27 | 42.4 |
| KRG93506 | Soybean | nucleus | 36.91 | 41.43 |
| CDY26717 | Canola | nucleus | 21.09 | 40.42 |
| KRH01137 | Soybean | nucleus | 38.73 | 39.37 |
| KRH40121 | Soybean | nucleus | 38.55 | 39.19 |
| CDX97845 | Canola | nucleus | 16.91 | 38.59 |
| CDY11652 | Canola | nucleus | 25.09 | 36.03 |
| CDY68857 | Canola | nucleus | 23.82 | 35.41 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 31.09 | 34.9 |
| CDX81900 | Canola | nucleus | 32.91 | 34.87 |
| CDX81493 | Canola | nucleus | 19.64 | 34.84 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 31.09 | 34.76 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 38.18 | 34.71 |
| Os01t0185900-01 | Rice | nucleus | 31.82 | 34.52 |
| CDY21693 | Canola | nucleus | 32.55 | 34.49 |
| CDY56082 | Canola | nucleus | 24.0 | 34.46 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 37.64 | 34.21 |
| CDX83804 | Canola | nucleus | 32.0 | 34.17 |
| CDX96692 | Canola | nucleus | 32.0 | 34.04 |
| Os06t0146250-00 | Rice | nucleus | 37.09 | 33.77 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 31.27 | 32.7 |
| CDY01891 | Canola | nucleus | 19.27 | 32.32 |
| CDX96044 | Canola | nucleus | 19.09 | 32.01 |
| OQU75809 | Sorghum | nucleus | 36.36 | 32.0 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 34.36 | 31.24 |
| Zm00001d008794_P001 | Maize | nucleus | 30.36 | 30.93 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 32.55 | 30.29 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 33.27 | 30.05 |
| EES02331 | Sorghum | nucleus | 29.09 | 29.2 |
| CDX72327 | Canola | nucleus | 15.09 | 29.12 |
| Zm00001d039532_P001 | Maize | nucleus | 28.73 | 28.88 |
| CDY22006 | Canola | nucleus | 25.64 | 28.78 |
| CDY07121 | Canola | nucleus | 25.64 | 28.48 |
| CDY16669 | Canola | nucleus | 25.27 | 28.25 |
| CDX75196 | Canola | nucleus | 14.36 | 27.92 |
| CDX94553 | Canola | nucleus | 24.91 | 27.9 |
| CDY67287 | Canola | nucleus | 14.55 | 27.59 |
| CDY22299 | Canola | nucleus | 14.55 | 27.59 |
| CDY39879 | Canola | nucleus | 14.91 | 26.71 |
| CDX67971 | Canola | nucleus | 14.18 | 26.26 |
| CDX88573 | Canola | nucleus | 14.36 | 26.25 |
| CDX79347 | Canola | nucleus | 14.18 | 26.17 |
| CDX68787 | Canola | nucleus | 15.09 | 26.02 |
| CDX82900 | Canola | nucleus | 24.55 | 25.91 |
| CDY21301 | Canola | nucleus | 23.82 | 25.84 |
| CDX90863 | Canola | nucleus | 23.82 | 25.84 |
| CDX87347 | Canola | nucleus | 14.0 | 25.67 |
| CDY19255 | Canola | nucleus | 11.09 | 25.63 |
| CDY70096 | Canola | nucleus | 15.45 | 24.64 |
| CDY12937 | Canola | nucleus | 24.36 | 24.28 |
| CDY19535 | Canola | nucleus | 24.0 | 23.91 |
| CDY24892 | Canola | nucleus | 21.82 | 22.9 |
| CDY72612 | Canola | nucleus | 9.64 | 21.99 |
| CDY08634 | Canola | nucleus | 19.82 | 21.67 |
| CDX86713 | Canola | nucleus | 3.82 | 17.8 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078D7F6 | EnsemblPlants:CDX85052 | ProteinID:CDX85052 | ProteinID:CDX85052.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00142494001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EE1679 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC05g20030D
Coordinates
chrLK031839:+:1747649..1750644
Molecular Weight (calculated)
59518.7 Da
IEP (calculated)
6.444
GRAVY (calculated)
-0.703
Length
550 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVILKLPTS DSLLKDKVLG SAQIHEATKV EEDHQELESA KAEMREVKED NEKLKGMLER IESDYKTLKL RFFDIIHQEE PSNNQTQDQN MIDLPKATTD
101: LSSLDQEREL VSLSLGRRSS SPSDNSSKKE EKTDATSNKV NDDEELTKAG LTLGFNSGNG PDPSVANPAN SSLENNLEDA PGETWPPSKV SGKRSSAAPA
201: SGGHVDGEGG QQNPVKRARV CVRARCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA PGCPVRKQVQ RCAEDMSILI TTYEGTHSHP LPLSATTMAS
301: TTSAAASMLL SGSSSSSTAE MIGNNLYDNS RFINNNNKSF YSPTLHSPLH PTVTLDLTAP QHSSSSLPSL NFNKFPNSFQ RFPSTSLNFS SNSSSSNSSL
401: LNLPATWGNG YSSYTPYPYN NVQFGTSNQV KTVQNNQSLT ETLTKALTSD PSFHSVIAAA ISSMVGSNGE QQMVGPRHPT SDSVQRTAAT ENNKGRGGYF
501: SSLLMSNIIA NNQTGASLDQ PSSQLTSLSM FNNSSSSSST TSFVNKEEKS
101: LSSLDQEREL VSLSLGRRSS SPSDNSSKKE EKTDATSNKV NDDEELTKAG LTLGFNSGNG PDPSVANPAN SSLENNLEDA PGETWPPSKV SGKRSSAAPA
201: SGGHVDGEGG QQNPVKRARV CVRARCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTVA PGCPVRKQVQ RCAEDMSILI TTYEGTHSHP LPLSATTMAS
301: TTSAAASMLL SGSSSSSTAE MIGNNLYDNS RFINNNNKSF YSPTLHSPLH PTVTLDLTAP QHSSSSLPSL NFNKFPNSFQ RFPSTSLNFS SNSSSSNSSL
401: LNLPATWGNG YSSYTPYPYN NVQFGTSNQV KTVQNNQSLT ETLTKALTSD PSFHSVIAAA ISSMVGSNGE QQMVGPRHPT SDSVQRTAAT ENNKGRGGYF
501: SSLLMSNIIA NNQTGASLDQ PSSQLTSLSM FNNSSSSSST TSFVNKEEKS
001: MEVLLKLPSS ESPLKDKFGS VQIHEANKGD GDHQELESAK AEMSEVKEEN EKLKGMLERI ESDYKSLKLR FFDIIQQEPS NTATKNQNMV DHPKPTTTDL
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
101: SSFDQERELV SLSLGRRSSS PSDSVPKKEE KTDAISAEVN ADEELTKAGL TLGINNGNGG EPKEGLSMEN RANSGSEEAW APGKVTGKRS SPAPASGGDA
201: DGEAGQQNHV KRARVCVRAR CDTPTMNDGC QWRKYGQKIA KGNPCPRAYY RCTVAPGCPV RKQVQRCADD MSILITTYEG THSHSLPLSA TTMASTTSAA
301: ASMLLSGSSS SPAAEMIGNN LYDNSRFNNN NKSFYSPTLH SPLHPTVTLD LTAPQHSSSS SSSLLSLNFN KFSNSFQRFP STSLNFSSTS STSSNPSTLN
401: LPAIWGNGYS SYTPYPYNNV QFGTSNLGKT VQNSQSLTET LTKALTSDPS FHSVIAAAIS TMVGSNGEQQ IVGPRHSISN NIQQTNTTNN NKGCGGYFSS
501: LLMSNIMASN QTGASLDQPS SQLPPFSMFK NSSSSSSTTN FVNKEEKS
Arabidopsis Description
WRKY72Probable WRKY transcription factor 72 [Source:UniProtKB/Swiss-Prot;Acc:Q9LXG8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.