Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX96692 | Canola | nucleus | 98.06 | 97.68 |
| Bra016535.1-P | Field mustard | nucleus | 89.71 | 97.47 |
| CDX86714 | Canola | nucleus | 14.95 | 90.59 |
| CDX86713 | Canola | nucleus | 18.84 | 82.2 |
| CDX81900 | Canola | nucleus | 81.36 | 80.73 |
| CDY21693 | Canola | nucleus | 80.39 | 79.77 |
| AT1G18860.1 | Thale cress | nucleus | 78.45 | 76.52 |
| CDY72612 | Canola | nucleus | 33.59 | 71.78 |
| CDY19255 | Canola | nucleus | 31.84 | 68.91 |
| CDY26717 | Canola | nucleus | 27.38 | 49.13 |
| CDX97845 | Canola | nucleus | 18.06 | 38.59 |
| CDY68857 | Canola | nucleus | 25.83 | 35.95 |
| PGSC0003DMT400046570 | Potato | nucleus | 36.31 | 35.62 |
| CDY56082 | Canola | nucleus | 26.21 | 35.25 |
| Solyc03g113120.2.1 | Tomato | nucleus | 35.73 | 35.11 |
| KRH63398 | Soybean | nucleus | 35.92 | 34.84 |
| CDY11652 | Canola | nucleus | 25.83 | 34.73 |
| CDX69548 | Canola | nucleus | 29.13 | 34.72 |
| CDY63770 | Canola | nucleus | 34.17 | 34.24 |
| Zm00001d045375_P001 | Maize | nucleus | 16.5 | 34.0 |
| CDX78611 | Canola | nucleus | 34.37 | 33.59 |
| CDX70593 | Canola | nucleus | 34.17 | 33.46 |
| CDX81493 | Canola | nucleus | 20.0 | 33.23 |
| TraesCS3B01G130000.1 | Wheat | nucleus | 31.26 | 32.86 |
| KRH56941 | Soybean | nucleus | 35.53 | 32.74 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 31.07 | 32.52 |
| CDX69549 | Canola | nucleus | 34.56 | 32.3 |
| CDX85052 | Canola | nucleus | 34.17 | 32.0 |
| VIT_17s0000g05810.t01 | Wine grape | nucleus | 37.48 | 31.9 |
| Os01t0185900-01 | Rice | nucleus | 31.26 | 31.76 |
| CDY01891 | Canola | nucleus | 20.19 | 31.71 |
| KRH03442 | Soybean | nucleus | 36.7 | 31.5 |
| CDX96044 | Canola | nucleus | 20.0 | 31.4 |
| KRH54509 | Soybean | nucleus | 37.48 | 31.38 |
| CDX85563 | Canola | nucleus | 18.84 | 31.29 |
| CDY28692 | Canola | nucleus | 32.43 | 31.04 |
| HORVU3Hr1G020210.2 | Barley | nucleus | 31.46 | 30.8 |
| Solyc06g070990.2.1 | Tomato | nucleus | 36.89 | 29.28 |
| CDY21301 | Canola | nucleus | 28.74 | 29.19 |
| Os06t0146250-00 | Rice | nucleus | 34.17 | 29.14 |
| CDX90863 | Canola | nucleus | 28.54 | 28.99 |
| Zm00001d008794_P001 | Maize | nucleus | 30.1 | 28.7 |
| CDY16669 | Canola | nucleus | 27.18 | 28.46 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 32.62 | 28.43 |
| CDX94553 | Canola | nucleus | 26.99 | 28.31 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 32.82 | 27.93 |
| EES02331 | Sorghum | nucleus | 29.71 | 27.92 |
| OQU75809 | Sorghum | nucleus | 33.59 | 27.68 |
| Zm00001d039532_P001 | Maize | nucleus | 29.32 | 27.61 |
| HORVU7Hr1G021260.1 | Barley | nucleus | 32.43 | 27.42 |
| CDX72327 | Canola | nucleus | 15.15 | 27.37 |
| CDY22006 | Canola | nucleus | 26.02 | 27.35 |
| CDX82900 | Canola | nucleus | 27.57 | 27.26 |
| CDY07121 | Canola | nucleus | 26.02 | 27.07 |
| CDY67287 | Canola | nucleus | 15.15 | 26.9 |
| CDY22299 | Canola | nucleus | 15.15 | 26.9 |
| CDX75196 | Canola | nucleus | 14.76 | 26.86 |
| CDY39879 | Canola | nucleus | 15.34 | 25.73 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 30.1 | 25.62 |
| CDX88573 | Canola | nucleus | 14.76 | 25.25 |
| CDY19535 | Canola | nucleus | 26.99 | 25.18 |
| CDY12937 | Canola | nucleus | 26.99 | 25.18 |
| CDX79347 | Canola | nucleus | 14.56 | 25.17 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 29.51 | 25.12 |
| CDX87347 | Canola | nucleus | 14.56 | 25.0 |
| CDX67971 | Canola | nucleus | 14.17 | 24.58 |
| CDX68787 | Canola | nucleus | 15.15 | 24.45 |
| CDY24892 | Canola | nucleus | 24.85 | 24.43 |
| CDY08634 | Canola | nucleus | 22.91 | 23.46 |
| CDY70096 | Canola | nucleus | 14.76 | 22.03 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:A0A078D635 | EnsemblPlants:CDX83804 | ProteinID:CDX83804 | ProteinID:CDX83804.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| GO:GO:0043565 | EnsemblPlantsGene:GSBRNA2T00139554001 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PANTHER:PTHR31429 | PANTHER:PTHR31429:SF24 | SMART:SM00774 | SUPFAM:SSF118290 | UniParc:UPI0004EEF2A5 | InterPro:WRKY_dom |
| InterPro:WRKY_dom_sf | SEG:seg | : | : | : | : |
Description
BnaC08g18410D
Coordinates
chrLK031834:-:543298..545903
Molecular Weight (calculated)
57756.0 Da
IEP (calculated)
6.465
GRAVY (calculated)
-0.935
Length
515 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEEFLRSG HGREERNEEM RKLDSDQEHD HIIRSKLDSI KVEMEEAKDE NRRLKSSLSR TKKEFEILQT QYNQLMVIIH EDPNKFSPKG YNQHKEEDED
101: KERTSDREEL VLLSLGRRLK SPVPSGSMTN KEEKMKDFMK ETDDDKRINE QGLSMGFEYK DLSNPSEKLE VDHNQEKTSL EVSNSNKIQS ENSFGFKNDG
201: DEHEDEEEPL PQNIAKKTRV SVRARCETPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTIA PSCPVRKQVQ RCSEDMSILI STYEGTHSHP LPMSATAMAS
301: ATSAAASMLL SRASSSSAAD LHGINFSLSS NSITPKPLLQ TSSGHPTVTL DLTTTSSSQQ PFLSMLNRFS APPSNVPRSN SYPSTNLSFS NNTNTLMNWG
401: GGSNRNEQYR APYGNISTHQ QSPYQHMIQT RAAGLSFDTF GRSSSSSPHP TQNSLDNVNF KNITHDQVQS LPAETIKAIT TDPNFQSALA TALSSIIGGD
501: LKIDNVTRNE AEKSP
101: KERTSDREEL VLLSLGRRLK SPVPSGSMTN KEEKMKDFMK ETDDDKRINE QGLSMGFEYK DLSNPSEKLE VDHNQEKTSL EVSNSNKIQS ENSFGFKNDG
201: DEHEDEEEPL PQNIAKKTRV SVRARCETPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTIA PSCPVRKQVQ RCSEDMSILI STYEGTHSHP LPMSATAMAS
301: ATSAAASMLL SRASSSSAAD LHGINFSLSS NSITPKPLLQ TSSGHPTVTL DLTTTSSSQQ PFLSMLNRFS APPSNVPRSN SYPSTNLSFS NNTNTLMNWG
401: GGSNRNEQYR APYGNISTHQ QSPYQHMIQT RAAGLSFDTF GRSSSSSPHP TQNSLDNVNF KNITHDQVQS LPAETIKAIT TDPNFQSALA TALSSIIGGD
501: LKIDNVTRNE AEKSP
001: MEKDDFLRSG HGREESHDEM RKLDSSHDDS HQEHDHIIRS KLDSTKVEMD EAKEENRRLK SSLSKIKKDF DILQTQYNQL MAKHNEPTKF QSKGHHQDKG
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
101: EDEDREKVNE REELVSLSLG RRLNSEVPSG SNKEEKNKDV EEAEGDRNYD DNEKSSIQGL SMGIEYKALS NPNEKLEIDH NQETMSLEIS NNNKIRSQNS
201: FGFKNDGDDH EDEDEILPQN LVKKTRVSVR SRCETPTMND GCQWRKYGQK IAKGNPCPRA YYRCTIAASC PVRKQVQRCS EDMSILISTY EGTHNHPLPM
301: SATAMASATS AAASMLLSGA SSSSSAAADL HGLNFSLSGN NITPKPKTHF LQSPSSSGHP TVTLDLTTSS SSQQPFLSML NRFSSPPSNV SRSNSYPSTN
401: LNFSNNTNTL MNWGGGGNPS DQYRAAYGNI NTHQQSPYHK IIQTRTAGSS FDPFGRSSSS HSPQINLDHI GIKNIISHQV PSLPAETIKA ITTDPSFQSA
501: LATALSSIMG GDLKIDHNVT RNEAEKSP
Arabidopsis Description
WRKY61WRKY DNA-binding protein 61 [Source:TAIR;Acc:AT1G18860]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.