Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES04642 | Sorghum | nucleus | 74.43 | 71.15 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 70.98 | 70.98 |
| TraesCS6A01G146900.1 | Wheat | nucleus | 71.26 | 70.86 |
| HORVU6Hr1G028790.1 | Barley | nucleus | 71.26 | 70.25 |
| Zm00001d015515_P001 | Maize | nucleus | 69.83 | 70.03 |
| TraesCS6B01G175100.2 | Wheat | nucleus | 70.69 | 69.3 |
| Zm00001d053746_P001 | Maize | nucleus | 62.93 | 68.22 |
| Os06t0649000-01 | Rice | nucleus | 60.06 | 62.02 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 40.52 | 50.36 |
| Bra019123.1-P | Field mustard | nucleus | 26.15 | 46.91 |
| PGSC0003DMT400073710 | Potato | nucleus | 27.87 | 44.7 |
| Solyc12g042590.1.1 | Tomato | nucleus | 27.3 | 43.98 |
| Solyc08g067340.2.1 | Tomato | nucleus | 31.9 | 43.87 |
| KRH61669 | Soybean | nucleus | 27.59 | 43.64 |
| CDX72327 | Canola | nucleus | 35.63 | 43.51 |
| PGSC0003DMT400019061 | Potato | nucleus | 31.61 | 43.48 |
| CDY22299 | Canola | nucleus | 36.21 | 43.45 |
| Bra008435.1-P | Field mustard | nucleus | 36.21 | 43.45 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 38.79 | 43.41 |
| CDX75196 | Canola | nucleus | 35.06 | 43.11 |
| CDY67287 | Canola | nucleus | 35.92 | 43.1 |
| KRH15674 | Soybean | nucleus | 34.2 | 42.2 |
| KRH47344 | Soybean | nucleus | 37.36 | 41.8 |
| PGSC0003DMT400019058 | Potato | nucleus | 31.32 | 41.76 |
| CDX87347 | Canola | nucleus | 35.92 | 41.67 |
| Bra035148.1-P | Field mustard | nucleus | 35.92 | 41.67 |
| CDX88573 | Canola | nucleus | 35.92 | 41.53 |
| KRH44560 | Soybean | nucleus | 37.07 | 41.21 |
| Solyc08g067360.2.1 | Tomato | nucleus | 30.46 | 41.09 |
| AT1G80840.1 | Thale cress | nucleus | 35.63 | 41.06 |
| CDX67971 | Canola | nucleus | 34.77 | 40.74 |
| Bra003588.1-P | Field mustard | nucleus | 34.77 | 40.74 |
| CDX79347 | Canola | nucleus | 34.48 | 40.27 |
| AT2G25000.1 | Thale cress | nucleus | 31.32 | 40.22 |
| KRH23643 | Soybean | nucleus | 35.63 | 40.13 |
| Bra010220.1-P | Field mustard | nucleus | 35.34 | 39.94 |
| CDY39879 | Canola | nucleus | 35.06 | 39.74 |
| AT4G31800.1 | Thale cress | nucleus | 35.06 | 39.35 |
| CDX68787 | Canola | nucleus | 35.92 | 39.19 |
| Bra011299.1-P | Field mustard | nucleus | 35.63 | 39.12 |
| KRH05350 | Soybean | nucleus | 34.48 | 38.46 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 34.77 | 38.17 |
| KRH09652 | Soybean | nucleus | 35.63 | 37.58 |
| Os09t0417600-02 | Rice | nucleus | 33.33 | 35.47 |
| Solyc03g116890.2.1 | Tomato | nucleus | 35.63 | 35.43 |
| Solyc06g068460.2.1 | Tomato | nucleus | 36.21 | 35.0 |
| Bra023983.1-P | Field mustard | nucleus | 34.48 | 34.78 |
| CDY70096 | Canola | nucleus | 34.48 | 34.78 |
| PGSC0003DMT400073396 | Potato | nucleus | 35.92 | 34.72 |
| PGSC0003DMT400051047 | Potato | nucleus | 35.34 | 34.65 |
| KRH52329 | Soybean | nucleus | 30.75 | 34.63 |
| Os09t0417800-01 | Rice | nucleus | 27.59 | 30.19 |
| Os01t0586800-00 | Rice | nucleus | 14.37 | 25.77 |
| Os05t0137500-00 | Rice | nucleus | 22.7 | 16.67 |
| Os01t0185900-01 | Rice | nucleus | 23.85 | 16.37 |
| Os01t0289600-00 | Rice | nucleus, plastid | 17.82 | 15.09 |
| Os06t0146250-00 | Rice | nucleus | 23.56 | 13.58 |
| Os02t0770500-00 | Rice | nucleus | 23.56 | 12.63 |
| Os05t0567200-00 | Rice | nucleus | 17.82 | 10.56 |
| Os01t0246700-01 | Rice | nucleus | 10.06 | 8.47 |
Protein Annotations
Description
WRKY GENE 71WRKY transcription factor, Defense response (Os02t0181300-01)
Coordinates
chr2:+:4542938..4544874
Molecular Weight (calculated)
37229.0 Da
IEP (calculated)
7.905
GRAVY (calculated)
-0.584
Length
348 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPWISTQPS LSLDLRVGLP ATAAVAMVKP KVLVEEDFFH QQPLKKDPEV AALEAELKRM GAENRQLSEM LAAVAAKYEA LQSQFSDMVT ASANNGGGGG
101: NNPSSTSEGG SVSPSRKRKS ESLDDSPPPP PPPHPHAAPH HMHVMPGAAA AGYADQTECT SGEPCKRIRE ECKPKISKLY VHADPSDLSL VVKDGYQWRK
201: YGQKVTKDNP CPRAYFRCSF APACPVKKKV QRSAEDNTIL VATYEGEHNH GQPPPPLQSA AQNSDGSGKS AGKPPHAPAA APPAPVVPHR QHEPVVVNGE
301: QQAAAASEMI RRNLAEQMAM TLTRDPSFKA ALVTALSGRI LELSPTKD
101: NNPSSTSEGG SVSPSRKRKS ESLDDSPPPP PPPHPHAAPH HMHVMPGAAA AGYADQTECT SGEPCKRIRE ECKPKISKLY VHADPSDLSL VVKDGYQWRK
201: YGQKVTKDNP CPRAYFRCSF APACPVKKKV QRSAEDNTIL VATYEGEHNH GQPPPPLQSA AQNSDGSGKS AGKPPHAPAA APPAPVVPHR QHEPVVVNGE
301: QQAAAASEMI RRNLAEQMAM TLTRDPSFKA ALVTALSGRI LELSPTKD
001: MDQYSSSLVD TSLDLTIGVT RMRVEEDPPT SALVEELNRV SAENKKLSEM LTLMCDNYNV LRKQLMEYVN KSNITERDQI SPPKKRKSPA REDAFSCAVI
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
101: GGVSESSSTD QDEYLCKKQR EETVVKEKVS RVYYKTEASD TTLVVKDGYQ WRKYGQKVTR DNPSPRAYFK CACAPSCSVK KKVQRSVEDQ SVLVATYEGE
201: HNHPMPSQID SNNGLNRHIS HGGSASTPVA ANRRSSLTVP VTTVDMIESK KVTSPTSRID FPQVQKLLVE QMASSLTKDP NFTAALAAAV TGKLYQQNHT
301: EK
Arabidopsis Description
WRKY40Probable WRKY transcription factor 40 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAH7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.