Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G419400.1 | Wheat | nucleus | 79.3 | 91.61 |
| TraesCS7B01G418400.1 | Wheat | nucleus | 79.03 | 90.18 |
| TraesCS7D01G497700.1 | Wheat | nucleus | 78.76 | 89.33 |
| TraesCS7A01G508700.1 | Wheat | nucleus | 77.42 | 88.89 |
| HORVU7Hr1G113830.1 | Barley | nucleus | 73.39 | 85.58 |
| TraesCS7D01G497800.1 | Wheat | nucleus | 74.46 | 84.97 |
| TraesCS7D01G497400.1 | Wheat | nucleus | 70.43 | 80.12 |
| Os06t0649000-01 | Rice | nucleus | 52.69 | 58.16 |
| Zm00001d036726_P001 | Maize | nucleus | 51.88 | 56.1 |
| EER90124 | Sorghum | nucleus | 50.81 | 55.26 |
| EER88729 | Sorghum | nucleus | 51.34 | 54.89 |
| Zm00001d046805_P001 | Maize | nucleus | 51.08 | 54.13 |
| TraesCS6D01G136200.1 | Wheat | nucleus | 47.85 | 51.15 |
| GSMUA_Achr7P05200_001 | Banana | nucleus | 34.95 | 46.43 |
| Bra019123.1-P | Field mustard | nucleus | 23.39 | 44.85 |
| PGSC0003DMT400073710 | Potato | nucleus | 24.73 | 42.4 |
| Solyc12g042590.1.1 | Tomato | nucleus | 24.46 | 42.13 |
| VIT_09s0018g00240.t01 | Wine grape | nucleus | 34.41 | 41.16 |
| Solyc08g067340.2.1 | Tomato | nucleus | 27.96 | 41.11 |
| PGSC0003DMT400019058 | Potato | nucleus | 28.49 | 40.61 |
| KRH61669 | Soybean | nucleus | 23.92 | 40.45 |
| KRH15674 | Soybean | nucleus | 30.65 | 40.43 |
| Bra008435.1-P | Field mustard | nucleus | 31.45 | 40.34 |
| CDY22299 | Canola | nucleus | 31.45 | 40.34 |
| PGSC0003DMT400019061 | Potato | nucleus | 27.42 | 40.32 |
| CDY67287 | Canola | nucleus | 31.18 | 40.0 |
| KRH23643 | Soybean | nucleus | 33.06 | 39.81 |
| AT1G80840.1 | Thale cress | nucleus | 32.26 | 39.74 |
| CDX67971 | Canola | nucleus | 31.72 | 39.73 |
| Bra003588.1-P | Field mustard | nucleus | 31.72 | 39.73 |
| Bra035148.1-P | Field mustard | nucleus | 31.99 | 39.67 |
| CDX87347 | Canola | nucleus | 31.99 | 39.67 |
| Solyc08g067360.2.1 | Tomato | nucleus | 27.42 | 39.53 |
| KRH47344 | Soybean | nucleus | 32.8 | 39.23 |
| CDX88573 | Canola | nucleus | 31.72 | 39.2 |
| CDX72327 | Canola | nucleus | 29.84 | 38.95 |
| CDX75196 | Canola | nucleus | 29.57 | 38.87 |
| CDX79347 | Canola | nucleus | 30.91 | 38.59 |
| AT2G25000.1 | Thale cress | nucleus | 27.96 | 38.38 |
| KRH44560 | Soybean | nucleus | 31.72 | 37.7 |
| KRH09652 | Soybean | nucleus | 33.33 | 37.58 |
| VIT_04s0008g05760.t01 | Wine grape | nucleus | 31.45 | 36.91 |
| KRH05350 | Soybean | nucleus | 30.38 | 36.22 |
| Bra010220.1-P | Field mustard | nucleus | 29.84 | 36.04 |
| CDY39879 | Canola | nucleus | 29.57 | 35.83 |
| TraesCS5D01G232700.1 | Wheat | nucleus | 26.08 | 35.79 |
| CDX68787 | Canola | nucleus | 30.65 | 35.74 |
| Bra011299.1-P | Field mustard | nucleus | 30.11 | 35.33 |
| AT4G31800.1 | Thale cress | nucleus | 28.76 | 34.52 |
| TraesCS5D01G232800.1 | Wheat | nucleus | 30.11 | 33.84 |
| KRH52329 | Soybean | nucleus | 27.15 | 32.69 |
| PGSC0003DMT400073396 | Potato | nucleus | 30.91 | 31.94 |
| Bra023983.1-P | Field mustard | nucleus | 29.57 | 31.88 |
| CDY70096 | Canola | nucleus | 29.57 | 31.88 |
| Solyc06g068460.2.1 | Tomato | nucleus | 30.65 | 31.67 |
| Solyc03g116890.2.1 | Tomato | nucleus | 29.57 | 31.43 |
| PGSC0003DMT400051047 | Potato | nucleus | 29.03 | 30.42 |
| TraesCS5D01G232900.1 | Wheat | nucleus | 30.11 | 30.19 |
| TraesCS3D01G113300.1 | Wheat | nucleus | 20.16 | 15.24 |
| TraesCS1D01G412500.1 | Wheat | nucleus | 22.85 | 14.38 |
| TraesCS6D01G306300.1 | Wheat | nucleus | 19.89 | 13.24 |
| TraesCS3D01G173300.2 | Wheat | plastid | 22.31 | 13.05 |
| TraesCS7D01G092600.1 | Wheat | nucleus | 20.97 | 12.89 |
| TraesCS7D01G092500.2 | Wheat | nucleus | 20.43 | 12.86 |
| TraesCS7D01G092400.1 | Wheat | nucleus | 19.35 | 11.9 |
| TraesCS7D01G092300.1 | Wheat | nucleus | 19.35 | 11.9 |
Protein Annotations
| MapMan:15.5.22 | Gene3D:2.20.25.80 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | InterPro:IPR003657 | InterPro:IPR036576 | PFAM:PF03106 | PFscan:PS50811 |
| PFscan:PS51257 | PANTHER:PTHR31429 | PANTHER:PTHR31429:SF33 | SMART:SM00774 | SUPFAM:SSF118290 | EnsemblPlantsGene:TraesCS7D01G497300 |
| EnsemblPlants:TraesCS7D01G497300.1 | InterPro:WRKY_dom | InterPro:WRKY_dom_sf | SEG:seg | : | : |
Description
No Description!
Coordinates
chr7D:+:603847727..603849099
Molecular Weight (calculated)
39853.8 Da
IEP (calculated)
9.384
GRAVY (calculated)
-0.558
Length
372 amino acids
Sequence
(BLAST)
(BLAST)
001: MSARLLQATT TSLAHARLAS GSSSSTSSSA AACVPIDPFP FLSYCEFKED MDEQWMIGQT SLSLGLNVGG PRRAPPVTRD LVEEDFMSSK KNHEAEALVA
101: ELRRVGEENR RLSDMLRALV AKYADLQGKV SGMMAAANNH HQSSTTSEGG SSASATRKRP RSGSLDTTSR NPSPPLAAAG SSGRFDVSVT VGPEQAECTP
201: VHEPCNSKRV RDDEVKASRV SKLYVHADPS DLSLVVKDGY QWRKYGQKVT KDNPCPRAYF RCSFAPSCPV KKKVQRSAED KTVLVATYDG DHNHAPPPKQ
301: QGSGGRKSGD AAAVRVSPAP ALVQQQQKQE ASTAEQVADR KNLVEQMAAT LTRDPGFKAA LASALSGRIP VA
101: ELRRVGEENR RLSDMLRALV AKYADLQGKV SGMMAAANNH HQSSTTSEGG SSASATRKRP RSGSLDTTSR NPSPPLAAAG SSGRFDVSVT VGPEQAECTP
201: VHEPCNSKRV RDDEVKASRV SKLYVHADPS DLSLVVKDGY QWRKYGQKVT KDNPCPRAYF RCSFAPSCPV KKKVQRSAED KTVLVATYDG DHNHAPPPKQ
301: QGSGGRKSGD AAAVRVSPAP ALVQQQQKQE ASTAEQVADR KNLVEQMAAT LTRDPGFKAA LASALSGRIP VA
001: MDGSSFLDIS LDLNTNPFSA KLPKKEVSVL ASTHLKRKWL EQDESASELR EELNRVNSEN KKLTEMLARV CESYNELHNH LEKLQSRQSP EIEQTDIPIK
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
101: KRKQDPDEFL GFPIGLSSGK TENSSSNEDH HHHHQQHEQK NQLLSCKRPV TDSFNKAKVS TVYVPTETSD TSLTVKDGFQ WRKYGQKVTR DNPSPRAYFR
201: CSFAPSCPVK KKVQRSAEDP SLLVATYEGT HNHLGPNASE GDATSQGGSS TVTLDLVNGC HRLALEKNER DNTMQEVLIQ QMASSLTKDS KFTAALAAAI
301: SGRLMEQSRT
Arabidopsis Description
WRKY18WRKY like transcription factor [Source:UniProtKB/TrEMBL;Acc:Q0WTZ3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.