Factsheet for GSMUA_Achr11P21550_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_14s0060g01700.t01	Wine grape	cytosol	74.3	91.58
KRH69267	Soybean	cytosol	83.73	89.68
KXG39416	Sorghum	mitochondrion	86.95	86.95
TraesCS4D01G170200.1	Wheat	plastid	85.94	86.64
TraesCS4B01G167200.1	Wheat	golgi, unclear	85.94	86.64
TraesCS4A01G137100.1	Wheat	mitochondrion	85.94	86.64
VIT_07s0005g00880.t01	Wine grape	mitochondrion	85.34	86.03
Zm00001d029084_P001	Maize	mitochondrion	85.74	85.74
Os03t0337900-01	Rice	mitochondrion	85.74	85.06
AT2G47510.1	Thale cress	mitochondrion	83.73	84.76
KRH69266	Soybean	mitochondrion	83.94	84.44
Bra004450.1-P	Field mustard	mitochondrion	78.11	83.12
Zm00001d029088_P002	Maize	mitochondrion	30.52	83.06
HORVU4Hr1G049590.3	Barley	plastid	85.94	80.15
CDY63850	Canola	cytosol	30.72	77.67
AT5G50950.1	Thale cress	cytosol	77.91	76.08
KRH31845	Soybean	mitochondrion	83.94	74.91
Solyc06g009840.2.1	Tomato	plastid	22.69	68.48
Bra021400.1-P	Field mustard	mitochondrion	69.88	56.96
Bra021413.1-P	Field mustard	cytosol	45.78	55.47
VIT_14s0060g01690.t01	Wine grape	mitochondrion	9.04	48.39
KRH30057	Soybean	cytosol	6.22	38.27

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10
MapMan:2.3.7	InterPro:Fum_hydII	InterPro:Fumarase/histidase_N	InterPro:Fumarase_C_C	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N
InterPro:Fumarate_lyase_fam	GO:GO:0003674	GO:GO:0003824	GO:GO:0004333	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006099	GO:GO:0006106	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0045239	EnsemblPlantsGene:GSMUA_Achr11G21550_001	EnsemblPlants:GSMUA_Achr11P21550_001
EnsemblPlants:GSMUA_Achr11T21550_001	InterPro:IPR024083	InterPro:L-Aspartase-like	UniProt:M0RU85	HAMAP:MF_00743	PFAM:PF00206
PFAM:PF10415	PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR11444	PANTHER:PTHR11444:SF1	SUPFAM:SSF48557
TIGRFAMs:TIGR00979	UniParc:UPI0002969283	SEG:seg	:	:	:

Description

Fumarate hydratase 1, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr11G21550_001]

Coordinates

chr11:+:22120094..22131243

Molecular Weight (calculated)

53534.6 Da

IEP (calculated)

8.244

GRAVY (calculated)

-0.131

Length

498 amino acids

Sequence
(BLAST)

001: MAMMVAAARR LAGRSGAAPA LSNVVLRSAT LQTMAGAFRE ERDTFGPIMV PADRLWGAQT QRSLQNFDIG GEREQMPEPI IRAFGVLKKC AAKVNMEYGL
101: DPTVGKAIMQ AAQEVAEGKL NDHFPLVIWQ TGSGTQSNMN ANEVIANRAA EILGHKRGEK FVHPNDHVNR SQSSNDTFPT VMHIAAAVEI NSRFIPSLKQ
201: LHSSLHTKSL EFKDIVKIGR THTQDATPLT LGQEFSGYTT QVKYGIERII GTLPRMYQLA QGGTAVGTGL NTKKGFDVKI ASAVAEETNL SFVTAENKFE
301: ALAAHDAFVE TSGALNTISA SLMKIANDIR LLGSGPRCGL GELILPENEP GSSIMPGKVN PTQCEALTMV CAQVMGNHVA ITVGGSNGHF ELNVYKPLIA
401: SGLLRSLRLL GDASASFEKN CVRGIKANHQ RISKLLHESL MLVTSLNPKI GYDNAAAVAK KAHKEGTTLK DAALNLNVLT AEEFDELVVP EKMLGPSD

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.