Factsheet for VIT_14s0060g01690.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67328	Canola	mitochondrion	62.37	36.02
Solyc09g075450.2.1	Tomato	plastid	59.14	11.13
VIT_07s0005g00880.t01	Wine grape	mitochondrion	56.99	10.73
Bra004450.1-P	Field mustard	mitochondrion	53.76	10.68
AT2G47510.1	Thale cress	mitochondrion	53.76	10.16
Zm00001d029084_P001	Maize	mitochondrion	52.69	9.84
KXG39416	Sorghum	mitochondrion	51.61	9.64
TraesCS4A01G137100.1	Wheat	mitochondrion	50.54	9.51
TraesCS4B01G167200.1	Wheat	golgi, unclear	50.54	9.51
TraesCS4D01G170200.1	Wheat	plastid	50.54	9.51
Os03t0337900-01	Rice	mitochondrion	49.46	9.16
GSMUA_Achr11P...	Banana	mitochondrion	48.39	9.04
AT5G50950.1	Thale cress	cytosol	49.46	9.02
HORVU4Hr1G049590.3	Barley	plastid	50.54	8.8
Bra021400.1-P	Field mustard	mitochondrion	46.24	7.04
Zm00001d048743_P001	Maize	mitochondrion	12.9	4.29
Zm00001d029088_P002	Maize	mitochondrion	1.08	0.55
Bra021413.1-P	Field mustard	cytosol	1.08	0.24
VIT_14s0060g01700.t01	Wine grape	cytosol	0.0	0.0
Solyc06g009830.2.1	Tomato	cytosol, mitochondrion, peroxisome	0.0	0.0

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	MapMan:35.1	ProteinID:CCB61891
ProteinID:CCB61891.1	UniProt:F6I4Q4	EMBL:FN596746	InterPro:Fum_hydII	InterPro:Fumarase/histidase_N	InterPro:Fumarate_lyase_N
GO:GO:0003674	GO:GO:0003824	GO:GO:0004333	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006106	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0045239
InterPro:IPR024083	InterPro:L-Aspartase-like	PFAM:PF00206	PANTHER:PTHR11444	PANTHER:PTHR11444:SF1	SUPFAM:SSF48557
UniParc:UPI000210A89E	ArrayExpress:VIT_14s0060g01690	EnsemblPlantsGene:VIT_14s0060g01690	EnsemblPlants:VIT_14s0060g01690.t01	:	:

Description

No Description!

Coordinates

chr14:+:1402188..1403873

Molecular Weight (calculated)

10716.1 Da

IEP (calculated)

8.483

GRAVY (calculated)

-0.278

Length

93 amino acids

Sequence
(BLAST)

1: MAMLRAYRCG SYRSLMPQFM EMLRYDCLRA FSTSFREEKD TLGTVLVPDD KLWGAQTQRS LQNFEIGGES ERMPEPIIRA FGILKKCAAK VDI

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.