Factsheet for Bra021400.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 8
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g009830.2.1	Tomato	cytosol, mitochondrion, peroxisome	25.04	83.61
CDY27481	Canola	mitochondrion	64.48	80.9
AT2G47510.1	Thale cress	mitochondrion	64.16	79.67
Bra004450.1-P	Field mustard	mitochondrion	60.23	78.63
KRH69267	Soybean	cytosol	56.63	74.41
Zm00001d029088_P002	Maize	mitochondrion	22.09	73.77
VIT_07s0005g00880.t01	Wine grape	mitochondrion	58.27	72.06
VIT_14s0060g01700.t01	Wine grape	cytosol	47.63	72.03
KRH69266	Soybean	mitochondrion	58.27	71.92
Solyc09g075450.2.1	Tomato	plastid	56.63	70.04
GSMUA_Achr11P...	Banana	mitochondrion	56.96	69.88
TraesCS4D01G170200.1	Wheat	plastid	56.46	69.84
TraesCS4B01G167200.1	Wheat	golgi, unclear	56.46	69.84
TraesCS4A01G137100.1	Wheat	mitochondrion	56.46	69.84
Os03t0337900-01	Rice	mitochondrion	56.96	69.32
KXG39416	Sorghum	mitochondrion	56.46	69.28
Zm00001d029084_P001	Maize	mitochondrion	55.48	68.07
HORVU4Hr1G049590.3	Barley	plastid	56.79	64.98
KRH31845	Soybean	mitochondrion	58.92	64.52
Bra021413.1-P	Field mustard	cytosol	34.04	50.61
VIT_14s0060g01690.t01	Wine grape	mitochondrion	7.04	46.24
KRH30057	Soybean	cytosol	5.73	43.21
Zm00001d048743_P001	Maize	mitochondrion	10.15	22.14

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10
MapMan:2.3.7	EnsemblPlantsGene:Bra021400	EnsemblPlants:Bra021400.1	EnsemblPlants:Bra021400.1-P	InterPro:Fum_hydII	InterPro:Fumarase/histidase_N
InterPro:Fumarase_C_C	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam	GO:GO:0003674	GO:GO:0003824
GO:GO:0004333	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091
GO:GO:0006099	GO:GO:0006106	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829
GO:GO:0045239	InterPro:IPR024083	InterPro:L-Aspartase-like	UniProt:M4DY04	HAMAP:MF_00743	PFAM:PF00206
PFAM:PF10415	PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR11444	PANTHER:PTHR11444:SF1	SUPFAM:SSF48557
UniParc:UPI0002544CBC	SEG:seg	:	:	:	:

Description

AT2G47510 (E=3e-181) FUM1 | FUM1 (FUMARASE 1); catalytic/ fumarate hydratase

Coordinates

chrA01:-:25365041..25371519

Molecular Weight (calculated)

67345.1 Da

IEP (calculated)

9.315

GRAVY (calculated)

-0.273

Length

611 amino acids

Sequence
(BLAST)

001: MRKKKLVRLE MVRRSLRMRA DIRIMKHLVT WPTSKVVLYV GSLEHIFKQE GMRGLYPYRH GSSLEIGRAT NHPLWVVKTR LQMDDVTLNL YDDDDDDYLS
101: GNDMMDPSED GHDSVQDDYT NAAGNRVRRR RKRRHSKCWK HFEILGDKLP DGTTKLSLIS PSVISKLSTT SVPTMAINVA SRRLSSGTAL RRAMRSYSTF
201: REERDTFGPI QVPSDKLWGA QTQRSLQNFE IGGERERMPE PIVRAFGVLK KCAAKVIANR AAEILGGDKC VHPNDHVNRS QSSNDTFPTV MHIAAATEIN
301: SRLIPSLKTL HSTLHSKSFQ FKDIVKIGRT HTQDAPPLTL GQEFGGYATQ VKYGLNRVTC TLPRLYQLAQ GGTAVGTGLN TKKGFDVKIA AAVAEETNLP
401: FVTAENKFEA LAAHDACVET SGSLNTIATS LMKIANDIRF LGSGPRCGLG ELVLPENEPG SSIMPGKVNP TQCEALTMVC AQVMGNHVAV TVGGSNGHFE
501: LNVFKPVIAS ALLHSIRLVA DASASFEKNC VRGIEANRER ISKLLHESLM LVTSLNPKIG YDNAAAVAKK ADKEGSTLKE AALKLGVLTA EEFDMCCFFC
601: SQSFIDQVLL Q

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.