Factsheet for Zm00001d029088_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g009840.2.1	Tomato	plastid	56.83	63.03
CDY63850	Canola	cytosol	44.81	41.62
KRH30057	Soybean	cytosol	17.49	39.51
VIT_14s0060g01700.t01	Wine grape	cytosol	81.97	37.13
Zm00001d029084_P001	Maize	mitochondrion	92.9	34.14
KXG39416	Sorghum	mitochondrion	92.9	34.14
Os03t0337900-01	Rice	mitochondrion	91.26	33.27
TraesCS4B01G167200.1	Wheat	golgi, unclear	89.62	33.2
TraesCS4A01G137100.1	Wheat	mitochondrion	89.62	33.2
TraesCS4D01G170200.1	Wheat	plastid	89.07	33.0
KRH69267	Soybean	cytosol	79.78	31.4
VIT_07s0005g00880.t01	Wine grape	mitochondrion	83.61	30.97
HORVU4Hr1G049590.3	Barley	plastid	89.07	30.52
GSMUA_Achr11P...	Banana	mitochondrion	83.06	30.52
AT2G47510.1	Thale cress	mitochondrion	80.33	29.88
KRH69266	Soybean	mitochondrion	79.23	29.29
Bra004450.1-P	Field mustard	mitochondrion	74.86	29.27
KRH31845	Soybean	mitochondrion	79.78	26.16
AT5G50950.1	Thale cress	cytosol	71.04	25.49
Bra021413.1-P	Field mustard	cytosol	50.82	22.63
Bra021400.1-P	Field mustard	mitochondrion	73.77	22.09
Zm00001d048743_P001	Maize	mitochondrion	3.28	2.14
VIT_14s0060g01690.t01	Wine grape	mitochondrion	0.55	1.08

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.40.30	Gene3D:1.20.200.10	MapMan:2.3.7
UniProt:A0A1D6K2F8	InterPro:Fum_hydII	InterPro:Fumarase_C_C	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0004333	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006091	GO:GO:0006099	GO:GO:0006106	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016829	GO:GO:0045239	InterPro:L-Aspartase-like	ProteinID:ONL97870.1	PFAM:PF00206	PFAM:PF10415
ScanProsite:PS00163	PANTHER:PTHR11444	PANTHER:PTHR11444:SF1	SUPFAM:SSF48557	UniParc:UPI0008438242	EnsemblPlantsGene:Zm00001d029088
EnsemblPlants:Zm00001d029088_P002	EnsemblPlants:Zm00001d029088_T002	SEG:seg	:	:	:

Description

Fumarate hydratase 1 mitochondrial

Coordinates

chr1:+:57477723..57481205

Molecular Weight (calculated)

19616.0 Da

IEP (calculated)

7.938

GRAVY (calculated)

0.015

Length

183 amino acids

Sequence
(BLAST)

001: MIFSSILGAC TKYFQHNHSG PRCGLGELIL PENEPGSSIM PGKVNPTQCE ALTMVCAQVM GNHVGVTIGG ANGHFELNVF KPMIAAGLLR SLRLLGDASV
101: SFEKNCVRGI QANHKRISQL LHESLMLVTS LNPKIGYDNA AAVAKKAHKE GTTLKKAALD LGVLTEQEFH ELVVPEKMIG PSD

Best Arabidopsis Sequence Match ( AT5G50950.2 )
(BLAST)

001: MAALTMQFEG EKKNVSEVAD VTLKQEDEQQ ERRSYSTPFR EERDTFGPIQ VPSDKLWGAQ TQRSLQNFEI GGDRERMPEP IVRAFGVLKK CAAKVNMEYG
101: LDPMIGEAIM EAAQEVAEGK LNDHFPLVVW QTGSGTQSNM NANEVIANRA AEILGHKRGE KIVHPNDHVN RSQSSNDTFP TVMHIAAATE ITSRLIPSLK
201: NLHSSLESKS FEFKDIVKIG RTHTQDATPL TLGQEFGGYA TQVEYGLNRV ACTLPRIYQL AQGGTAVGTG LNTKKGFDVK IAAAVAEETN LPFVTAENKF
301: EALAAHDACV ETSGSLNTIA TSLMKIANDI RFLGSGPRCG LGELSLPENE PGSSIMPGKV NPTQCEALTM VCAQVMGNHV AVTIGGSNGH FELNVFKPVI
401: ASALLHSIRL IADASASFEK NCVRGIEANR ERISKLLHES LMLVTSLNPK IGYDNAAAVA KRAHKEGCTL KHAAMKLGVL TSEEFDTLVV PEKMIGPSD

Arabidopsis Description

FUM2AT5G50950 protein [Source:UniProtKB/TrEMBL;Acc:B9DFR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.