Factsheet for VIT_14s0060g01700.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 3
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g009830.2.1	Tomato	cytosol, mitochondrion, peroxisome	37.87	83.61
Zm00001d029088_P002	Maize	mitochondrion	37.13	81.97
GSMUA_Achr11P...	Banana	mitochondrion	91.58	74.3
VIT_07s0005g00880.t01	Wine grape	mitochondrion	90.84	74.29
TraesCS4A01G137100.1	Wheat	mitochondrion	89.36	73.08
TraesCS4B01G167200.1	Wheat	golgi, unclear	89.36	73.08
TraesCS4D01G170200.1	Wheat	plastid	89.36	73.08
KXG39416	Sorghum	mitochondrion	89.85	72.89
AT2G47510.1	Thale cress	mitochondrion	87.38	71.75
Os03t0337900-01	Rice	mitochondrion	88.86	71.51
Zm00001d029084_P001	Maize	mitochondrion	88.12	71.49
Solyc09g075450.2.1	Tomato	plastid	86.63	70.85
Bra004450.1-P	Field mustard	mitochondrion	81.68	70.51
HORVU4Hr1G049590.3	Barley	plastid	89.11	67.42
AT5G50950.1	Thale cress	cytosol	81.68	64.71
Bra021413.1-P	Field mustard	cytosol	54.7	53.77
Bra021400.1-P	Field mustard	mitochondrion	72.03	47.63
Zm00001d048743_P001	Maize	mitochondrion	25.0	36.07
CDY67328	Canola	mitochondrion	0.0	0.0
VIT_14s0060g01690.t01	Wine grape	mitochondrion	0.0	0.0

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10
MapMan:2.3.7	ProteinID:CCB61890	ProteinID:CCB61890.1	UniProt:F6I4Q3	EMBL:FN596746	InterPro:Fum_hydII
InterPro:Fumarase/histidase_N	InterPro:Fumarase_C_C	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam	GO:GO:0003674
GO:GO:0003824	GO:GO:0004333	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006091	GO:GO:0006099	GO:GO:0006106	GO:GO:0006108	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0045239	InterPro:IPR024083	InterPro:L-Aspartase-like
HAMAP:MF_00743	PFAM:PF00206	PFAM:PF10415	PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR11444
PANTHER:PTHR11444:SF1	SUPFAM:SSF48557	UniParc:UPI000210A89D	ArrayExpress:VIT_14s0060g01700	EnsemblPlantsGene:VIT_14s0060g01700	EnsemblPlants:VIT_14s0060g01700.t01
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr14:+:1405912..1412985

Molecular Weight (calculated)

43563.5 Da

IEP (calculated)

7.413

GRAVY (calculated)

-0.166

Length

404 amino acids

Sequence
(BLAST)

001: MEYGLDPSIG KAIMQAAQEV AEGKLNDHFP LVIWQTGSGT QSNMNANEVI ANRAAEILGH KRGEKFVHPN DHVNRSQSSN DTFPTVMHIA AGVEINSRFI
101: PKLKQLHTSL HSKSLEFKDI IKIGRTHTQD ATPLTLGQEF SGYSTQVKYG IDRVMCTLPR MYQYLAQGGM AVGTGLNTKK GFDVKIAATV AEETNLPFIT
201: SENKFEALAA HDAFVETSGA LNTICASLMK IGNDIRLLGS GPRCGLGELT LPDNEPGSSI MPGKVNPTQC EALTMVCAQV MGNHVAITVG GSNGHFELNV
301: YKPLIASGLL RSLRLLGDAS ASFEKNCIRG IQANQERISK LLHESLMLVT SLNPKIGYDN AAAVAKKAHK EGTTLKHAAL NLGVLTSEEF EKLVVPEKMI
401: GPSD

Best Arabidopsis Sequence Match ( AT5G50950.2 )
(BLAST)

001: MAALTMQFEG EKKNVSEVAD VTLKQEDEQQ ERRSYSTPFR EERDTFGPIQ VPSDKLWGAQ TQRSLQNFEI GGDRERMPEP IVRAFGVLKK CAAKVNMEYG
101: LDPMIGEAIM EAAQEVAEGK LNDHFPLVVW QTGSGTQSNM NANEVIANRA AEILGHKRGE KIVHPNDHVN RSQSSNDTFP TVMHIAAATE ITSRLIPSLK
201: NLHSSLESKS FEFKDIVKIG RTHTQDATPL TLGQEFGGYA TQVEYGLNRV ACTLPRIYQL AQGGTAVGTG LNTKKGFDVK IAAAVAEETN LPFVTAENKF
301: EALAAHDACV ETSGSLNTIA TSLMKIANDI RFLGSGPRCG LGELSLPENE PGSSIMPGKV NPTQCEALTM VCAQVMGNHV AVTIGGSNGH FELNVFKPVI
401: ASALLHSIRL IADASASFEK NCVRGIEANR ERISKLLHES LMLVTSLNPK IGYDNAAAVA KRAHKEGCTL KHAAMKLGVL TSEEFDTLVV PEKMIGPSD

Arabidopsis Description

FUM2AT5G50950 protein [Source:UniProtKB/TrEMBL;Acc:B9DFR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.