CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 9
plastid 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029084_P001	Maize	mitochondrion	97.39	97.39
TraesCS4D01G170200.1	Wheat	plastid	93.98	94.74
TraesCS4B01G167200.1	Wheat	golgi, unclear	93.98	94.74
TraesCS4A01G137100.1	Wheat	mitochondrion	93.98	94.74
Os03t0337900-01	Rice	mitochondrion	95.38	94.62
Zm00001d029088_P002	Maize	mitochondrion	34.14	92.9
VIT_14s0060g01700.t01	Wine grape	cytosol	72.89	89.85
KRH69267	Soybean	cytosol	82.13	87.96
HORVU4Hr1G049590.3	Barley	plastid	93.57	87.27
GSMUA_Achr11P...	Banana	mitochondrion	86.95	86.95
VIT_07s0005g00880.t01	Wine grape	mitochondrion	84.94	85.63
AT2G47510.1	Thale cress	mitochondrion	83.33	84.35
KRH69266	Soybean	mitochondrion	83.33	83.84
Bra004450.1-P	Field mustard	mitochondrion	78.31	83.33
CDY63850	Canola	cytosol	30.92	78.17
AT5G50950.1	Thale cress	cytosol	77.31	75.49
KRH31845	Soybean	mitochondrion	83.33	74.37
Solyc06g009840.2.1	Tomato	plastid	22.29	67.27
Bra021400.1-P	Field mustard	mitochondrion	69.28	56.46
Bra021413.1-P	Field mustard	cytosol	44.18	53.53
VIT_14s0060g01690.t01	Wine grape	mitochondrion	9.64	51.61
KRH30057	Soybean	cytosol	6.63	40.74

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10
MapMan:2.3.7	UniProt:A0A1B6QND7	InterPro:Fum_hydII	InterPro:Fumarase/histidase_N	InterPro:Fumarase_C_C	InterPro:Fumarate_lyase_CS
InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam	GO:GO:0003674	GO:GO:0003824	GO:GO:0004333	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006091	GO:GO:0006099	GO:GO:0006106
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016829	GO:GO:0045239	InterPro:IPR024083
EnsemblPlants:KXG39416	ProteinID:KXG39416	ProteinID:KXG39416.1	ProteinID:KXG39417.1	InterPro:L-Aspartase-like	HAMAP:MF_00743
PFAM:PF00206	PFAM:PF10415	PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR11444	PANTHER:PTHR11444:SF1
MetaCyc:PWY-5392	MetaCyc:PWY-561	MetaCyc:PWY-5690	MetaCyc:PWY-5913	MetaCyc:PWY-6728	MetaCyc:PWY-6969
MetaCyc:PWY-7254	MetaCyc:PWY-7384	EnsemblPlantsGene:SORBI_3001G378800	SUPFAM:SSF48557	TIGRFAMs:TIGR00979	UniParc:UPI0001C80A82
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:66713577..66723706

Molecular Weight (calculated)

53527.5 Da

IEP (calculated)

7.936

GRAVY (calculated)

-0.133

Length

498 amino acids

Sequence
(BLAST)

001: MAMALRRLAG VSGSPSASAA AAALLLRPAL TRPISTGFRE ERDTFGPIQV PNDKLWGAQT QRSLQNFDIG GERERMPVPI IRAFGVLKKC AAKVNMEYGL
101: DPTIGKAIMQ AAEEVAEGKL DDHFPLVIWQ TGSGTQSNMN ANEVIANRAA EILGHKRGEK FVHPNDHVNR SQSSNDTFPT VMHIAAAVEI NSRFIPSLQQ
201: LHDSLHSKTV EFKDIIKIGR THTQDATPLT LGQEFSGYTT QVKYGIDRIN CTLPRMYQLA QGGTAVGTGL NTKKGFDVKI AAAVAEETNL PFVTAENKFE
301: ALAAHDAFVE SSGAVNTISA SLMKIANDIR LLGSGPRCGL GELILPENEP GSSIMPGKVN PTQCEALTMV CAQVMGNHVG VTVGGANGHF ELNVFKPMIA
401: AGLLRSLRLL GDASVSFEKN CVRGIQANHK RISQLLHESL MLVTSLNPKI GYDNAAAVAK KAHKEGTTLK KAALDLGVLT EQEFHELVVP EKMIGPSD

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.