CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
plastid 2
cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d029088_P002	Maize	mitochondrion	39.51	17.49
CDY51427	Canola	cytosol	43.21	9.8
KRH69267	Soybean	cytosol	46.91	8.17
Bra021413.1-P	Field mustard	cytosol	40.74	8.03
KRH69266	Soybean	mitochondrion	45.68	7.47
AT2G47510.1	Thale cress	mitochondrion	43.21	7.11
Solyc09g075450.2.1	Tomato	plastid	41.98	6.88
Bra004450.1-P	Field mustard	mitochondrion	39.51	6.84
Os03t0337900-01	Rice	mitochondrion	41.98	6.77
KRH31845	Soybean	mitochondrion	45.68	6.63
KXG39416	Sorghum	mitochondrion	40.74	6.63
TraesCS4D01G170200.1	Wheat	plastid	39.51	6.48
TraesCS4B01G167200.1	Wheat	golgi, unclear	39.51	6.48
TraesCS4A01G137100.1	Wheat	mitochondrion	39.51	6.48
AT5G50950.1	Thale cress	cytosol	40.74	6.47
Zm00001d029084_P001	Maize	mitochondrion	39.51	6.43
GSMUA_Achr11P...	Banana	mitochondrion	38.27	6.22
HORVU4Hr1G049590.3	Barley	plastid	38.27	5.81
Bra021400.1-P	Field mustard	mitochondrion	43.21	5.73
Solyc06g009830.2.1	Tomato	cytosol, mitochondrion, peroxisome	3.7	1.64
CDY57716	Canola	nucleus	0.0	0.0
CDY51426	Canola	mitochondrion	0.0	0.0
Zm00001d048743_P001	Maize	mitochondrion	0.0	0.0

Protein Annotations

EMBL:ACUP02006843	EnsemblPlants:KRH30057	EnsemblPlantsGene:GLYMA_11G155200	Gene3D:1.20.200.10	ProteinID:KRH30057	ProteinID:KRH30057.1
UniParc:UPI000296A2D3	UniProt:K7LQM4	MapMan:35.2	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:12699697..12702736

Molecular Weight (calculated)

9232.2 Da

IEP (calculated)

8.499

GRAVY (calculated)

0.009

Length

81 amino acids

Sequence
(BLAST)

1: MSILLVMGNH VAVTVGGSNG HFELNMFKPM FANYLLHVKQ TIFLLTTSFY PPMRSWDLAT TSKNLFCRYL DGEFKSGDDH K

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.