Factsheet for Zm00001d048743_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g009820.2.1	Tomato	cytosol, mitochondrion, peroxisome	35.71	68.03
CDY53744	Canola	cytosol, nucleus, peroxisome	30.0	36.05
Zm00001d029084_P001	Maize	mitochondrion	44.64	25.1
VIT_14s0060g01700.t01	Wine grape	cytosol	36.07	25.0
Bra004450.1-P	Field mustard	mitochondrion	39.29	23.5
AT2G47510.1	Thale cress	mitochondrion	39.64	22.56
KRH69267	Soybean	cytosol	37.14	22.37
VIT_07s0005g00880.t01	Wine grape	mitochondrion	38.21	21.66
KRH69266	Soybean	mitochondrion	37.5	21.21
AT5G50950.1	Thale cress	cytosol	38.21	20.98
KRH31845	Soybean	mitochondrion	37.86	19.0
VIT_14s0060g01690.t01	Wine grape	mitochondrion	4.29	12.9
Bra021413.1-P	Field mustard	cytosol	18.21	12.41
Bra021400.1-P	Field mustard	mitochondrion	22.14	10.15
Zm00001d029088_P002	Maize	mitochondrion	2.14	3.28
KRH30057	Soybean	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:2.3.7	UniProt:A0A1D6PPV6	ProteinID:AQK48825.1	InterPro:Fumarase/histidase_N
InterPro:Fumarate_lyase_N	GO:GO:0003674	GO:GO:0003824	GO:GO:0004333	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0006106	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0045239	InterPro:IPR024083	InterPro:L-Aspartase-like	PFAM:PF00206	SUPFAM:SSF48557	UniParc:UPI000842640B
EnsemblPlantsGene:Zm00001d048743	EnsemblPlants:Zm00001d048743_P001	EnsemblPlants:Zm00001d048743_T001	:	:	:

Description

Fumarate hydratase 1 mitochondrial

Coordinates

chr4:+:4833676..4836651

Molecular Weight (calculated)

30772.0 Da

IEP (calculated)

8.670

GRAVY (calculated)

-0.241

Length

280 amino acids

Sequence
(BLAST)

001: MLKPAKVDRM MVVTTCSHIY TPQKISSLVF KKITNRVAYK TVIKAHSDVV LKAKSMADKV EWANKTKVVI QSKGGSFKGP SIEGGSMRQI NLDGALVNMD
101: YGLDPTIGKA IIQAAEEVVE GKLDDHFPLV TWQTGSGTQS NMNANEVNMD YGLDPTIGKA IIQAAEEVAE GKLDDHFPLV IWQTGSGTQS NMNANEVIAN
201: RASEILGHKG GQKFVHPNDH VNRSQSSNDT FPTVMHIATT VEIHSRFIPS LQQLHDSLHS KVLTSPFLRN YFTMLVKCLP

Best Arabidopsis Sequence Match ( AT5G50950.4 )
(BLAST)

001: MAALTMQFEG EKKNVSEVAD VTLKQEDEQQ ERRSYSTPFR EERDTFGPIQ VPSDKLWGAQ TQRSLQNFEI GGDRERMPEP IVRAFGVLKK CAAKVNMEYG
101: LDPMIGEAIM EAAQEVAEGK LNDHFPLVVW QTGSGTQSNM NANEVIANRA AEILGHKRGE KIVHPNDHVN RSQSSNDTFP TVMHIAAATE ITSRLIPSLK
201: NLHSSLESKS FEFKDIVKIG RTHTQDATPL TLGQEFGGYA TQVEYGLNRV ACTLPRIYQL AQGGTAVGTG LNTKKGFDVK IAAAVAEETN LPFVTAENKF
301: EALAAHDACV ETSGSLNTIA TSLMKIANDI RFLGSGPRCG LGELSLPENE PGSSIMPGKV NPTQCEALTM VCAQVMGNHV AVTIGGSNGH FELNVFKPVI
401: ASALLHVH

Arabidopsis Description

FUM2AT5G50950 protein [Source:UniProtKB/TrEMBL;Acc:B9DFR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.