CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH69266	Soybean	mitochondrion	95.27	89.49
AT2G47510.1	Thale cress	mitochondrion	88.82	83.94
Bra004450.1-P	Field mustard	mitochondrion	84.3	83.76
GSMUA_Achr11P...	Banana	mitochondrion	89.68	83.73
VIT_07s0005g00880.t01	Wine grape	mitochondrion	88.82	83.6
KXG39416	Sorghum	mitochondrion	87.96	82.13
TraesCS4B01G167200.1	Wheat	golgi, unclear	86.67	81.58
TraesCS4A01G137100.1	Wheat	mitochondrion	86.67	81.58
TraesCS4D01G170200.1	Wheat	plastid	86.45	81.38
Zm00001d029084_P001	Maize	mitochondrion	86.88	81.12
Os03t0337900-01	Rice	mitochondrion	87.31	80.88
Zm00001d029088_P002	Maize	mitochondrion	31.4	79.78
KRH31845	Soybean	mitochondrion	94.84	79.03
AT5G50950.1	Thale cress	cytosol	83.87	76.47
HORVU4Hr1G049590.3	Barley	plastid	86.45	75.28
Bra021400.1-P	Field mustard	mitochondrion	74.41	56.63
Bra021413.1-P	Field mustard	cytosol	49.03	55.47
KRH30057	Soybean	cytosol	8.17	46.91
Zm00001d048743_P001	Maize	mitochondrion	22.37	37.14
CDY67328	Canola	mitochondrion	9.68	27.95

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10
EntrezGene:100813552	MapMan:2.3.7	EMBL:ACUP02000698	InterPro:Fum_hydII	InterPro:Fumarase/histidase_N	InterPro:Fumarase_C_C
InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam	EnsemblPlantsGene:GLYMA_02G015800	GO:GO:0003674	GO:GO:0003824
GO:GO:0004333	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0006091	GO:GO:0006099	GO:GO:0006106	GO:GO:0006108	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016829	GO:GO:0045239	UniProt:I1JBJ2	InterPro:IPR024083	EnsemblPlants:KRH69267
ProteinID:KRH69267	ProteinID:KRH69267.1	InterPro:L-Aspartase-like	HAMAP:MF_00743	PFAM:PF00206	PFAM:PF10415
PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR11444	PANTHER:PTHR11444:SF1	MetaCyc:PWY-5392	MetaCyc:PWY-561
MetaCyc:PWY-5690	MetaCyc:PWY-5913	MetaCyc:PWY-6728	MetaCyc:PWY-6969	MetaCyc:PWY-7254	MetaCyc:PWY-7384
SUPFAM:SSF48557	TIGRFAMs:TIGR00979	UniParc:UPI0002336F21	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:1423523..1432617

Molecular Weight (calculated)

50273.4 Da

IEP (calculated)

6.989

GRAVY (calculated)

-0.189

Length

465 amino acids

Sequence
(BLAST)

001: MALSFREERD TFGAIQVPSE KLWGAQTQRS LQNFDIGGPR ERMPEPIIRA FGVLKKCAAK VNMEYGLDPN VGEAIMQAAQ EVAEGKLNDH FPLVVWQTGS
101: GTQSNMNANE VIANRAAEIL GHKRGEKFVH PNDHVNRSQS SNDTFPTVMH IAAATEINSR LIPSLKTLHD TLNSKSVEFK DIVKIGRTHT QDATPLTLGQ
201: EFSGYTTQVK YGIDRVIDTL PRMYQLAQGG TAVGTGLNTK KGFDAKIAAA VAEETNLPFV TAENKFEALA AHDAFVETSG ALNTVVASLM KIANDIRLLG
301: SGPRCGLGEL ILPENEPGSS IMPGKVNPTQ CEALTMVCAQ VMGNHVAITV GGSNGHFELN VFKPMIANCL LHSLRLLGDS SASFEKNCLR GIQANRERIS
401: KLLHESLMLV TSLNPKIGYD KAATVAKTAH KEGTTLKEAA LKLGVLCSED FDKLVVPEKM LGPSD

Best Arabidopsis Sequence Match ( AT5G50950.2 )
(BLAST)

001: MAALTMQFEG EKKNVSEVAD VTLKQEDEQQ ERRSYSTPFR EERDTFGPIQ VPSDKLWGAQ TQRSLQNFEI GGDRERMPEP IVRAFGVLKK CAAKVNMEYG
101: LDPMIGEAIM EAAQEVAEGK LNDHFPLVVW QTGSGTQSNM NANEVIANRA AEILGHKRGE KIVHPNDHVN RSQSSNDTFP TVMHIAAATE ITSRLIPSLK
201: NLHSSLESKS FEFKDIVKIG RTHTQDATPL TLGQEFGGYA TQVEYGLNRV ACTLPRIYQL AQGGTAVGTG LNTKKGFDVK IAAAVAEETN LPFVTAENKF
301: EALAAHDACV ETSGSLNTIA TSLMKIANDI RFLGSGPRCG LGELSLPENE PGSSIMPGKV NPTQCEALTM VCAQVMGNHV AVTIGGSNGH FELNVFKPVI
401: ASALLHSIRL IADASASFEK NCVRGIEANR ERISKLLHES LMLVTSLNPK IGYDNAAAVA KRAHKEGCTL KHAAMKLGVL TSEEFDTLVV PEKMIGPSD

Arabidopsis Description

FUM2AT5G50950 protein [Source:UniProtKB/TrEMBL;Acc:B9DFR5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.