Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT2G47510.1 | Thale cress | mitochondrion | 83.92 | 86.99 |
| KRH69267 | Soybean | cytosol | 76.47 | 83.87 |
| Solyc06g009830.2.1 | Tomato | cytosol, mitochondrion, peroxisome | 30.0 | 83.61 |
| VIT_14s0060g01700.t01 | Wine grape | cytosol | 64.71 | 81.68 |
| KRH69266 | Soybean | mitochondrion | 77.84 | 80.2 |
| VIT_07s0005g00880.t01 | Wine grape | mitochondrion | 77.25 | 79.76 |
| Solyc09g075450.2.1 | Tomato | plastid | 76.47 | 78.95 |
| TraesCS4D01G170200.1 | Wheat | plastid | 75.69 | 78.14 |
| TraesCS4B01G167200.1 | Wheat | golgi, unclear | 75.49 | 77.94 |
| TraesCS4A01G137100.1 | Wheat | mitochondrion | 75.49 | 77.94 |
| GSMUA_Achr11P... | Banana | mitochondrion | 76.08 | 77.91 |
| KXG39416 | Sorghum | mitochondrion | 75.49 | 77.31 |
| Os03t0337900-01 | Rice | mitochondrion | 75.69 | 76.89 |
| Zm00001d029084_P001 | Maize | mitochondrion | 74.9 | 76.71 |
| HORVU4Hr1G049590.3 | Barley | plastid | 75.49 | 72.1 |
| KRH31845 | Soybean | mitochondrion | 78.04 | 71.33 |
| Zm00001d029088_P002 | Maize | mitochondrion | 25.49 | 71.04 |
| VIT_14s0060g01690.t01 | Wine grape | mitochondrion | 9.02 | 49.46 |
| KRH30057 | Soybean | cytosol | 6.47 | 40.74 |
| Zm00001d048743_P001 | Maize | mitochondrion | 20.98 | 38.21 |
Protein Annotations
| KEGG:00020+4.2.1.2 | KEGG:00620+4.2.1.2 | KEGG:00720+4.2.1.2 | Gene3D:1.10.275.10 | Gene3D:1.10.40.30 | Gene3D:1.20.200.10 |
| MapMan:2.3.7 | EntrezGene:835168 | ProteinID:AED96014.1 | EMBL:AK316874 | ArrayExpress:AT5G50950 | EnsemblPlantsGene:AT5G50950 |
| RefSeq:AT5G50950 | TAIR:AT5G50950 | RefSeq:AT5G50950-TAIR-G | EnsemblPlants:AT5G50950.1 | TAIR:AT5G50950.1 | Unigene:At.6963 |
| UniProt:B9DFR5 | Symbol:FUM2 | InterPro:Fum_hydII | InterPro:Fumarase/histidase_N | InterPro:Fumarase_C_C | InterPro:Fumarate_lyase_CS |
| InterPro:Fumarate_lyase_N | InterPro:Fumarate_lyase_fam | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004333 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006091 | GO:GO:0006099 | GO:GO:0006106 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016829 | GO:GO:0045239 | InterPro:IPR024083 |
| InterPro:L-Aspartase-like | HAMAP:MF_00743 | RefSeq:NP_851166.1 | PFAM:PF00206 | PFAM:PF10415 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0009005 | PO:PO:0025195 | PO:PO:0025281 | PRINTS:PR00149 |
| ScanProsite:PS00163 | PANTHER:PTHR11444 | PANTHER:PTHR11444:SF1 | SUPFAM:SSF48557 | TIGRFAMs:TIGR00979 | UniParc:UPI00001970B5 |
Description
FUM2AT5G50950 protein [Source:UniProtKB/TrEMBL;Acc:B9DFR5]
Coordinates
chr5:+:20729612..20733570
Molecular Weight (calculated)
55768.8 Da
IEP (calculated)
7.391
GRAVY (calculated)
-0.228
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALTMQFEG EKKNVSEVAD VTLKQEDEQQ ERRSYSTPFR EERDTFGPIQ VPSDKLWGAQ TQRSLQNFEI GGDRERMPEP IVRAFGVLKK CAAKVNMEYG
101: LDPMIGEAIM EAAQEVAEGK LNDHFPLVVW QTGSGTQSNM NANEVIANRA AEILGHKRGE KIVHPNDHVN RSQSSNDTFP TVMHIAAATE ITSRLIPSLK
201: NLHSSLESKS FEFKDIVKIG RTHTQDATPL TLGQEFGGYA TQVEYGLNRV ACTLPRIYQL AQGGTAVGTG LNTKKGFDVK IAAAVAEETN LPFVTAENKF
301: EALAAHDACV ETSGSLNTIA TSLMKIANDI RFLGSGPRCG LGELSLPENE PGSSIMPGKV NPTQCEALTM VCAQVMGNHV AVTIGGSNGH FELNVFKPVI
401: ASALLHSIRL IADASASFEK NCVRGIEANR ERISKLLHES LMLVTSLNPK IGYDNAAAVA KRAHKEGCTL KVNNKLLTFS SLNKSEFKPI FSKRKHVHVC
501: YNIFVVLFWI
101: LDPMIGEAIM EAAQEVAEGK LNDHFPLVVW QTGSGTQSNM NANEVIANRA AEILGHKRGE KIVHPNDHVN RSQSSNDTFP TVMHIAAATE ITSRLIPSLK
201: NLHSSLESKS FEFKDIVKIG RTHTQDATPL TLGQEFGGYA TQVEYGLNRV ACTLPRIYQL AQGGTAVGTG LNTKKGFDVK IAAAVAEETN LPFVTAENKF
301: EALAAHDACV ETSGSLNTIA TSLMKIANDI RFLGSGPRCG LGELSLPENE PGSSIMPGKV NPTQCEALTM VCAQVMGNHV AVTIGGSNGH FELNVFKPVI
401: ASALLHSIRL IADASASFEK NCVRGIEANR ERISKLLHES LMLVTSLNPK IGYDNAAAVA KRAHKEGCTL KVNNKLLTFS SLNKSEFKPI FSKRKHVHVC
501: YNIFVVLFWI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.