Factsheet for Bra021413.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
EpiLoc:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53742	Canola	cytosol, peroxisome, plastid	79.08	74.54
Solyc06g009830.2.1	Tomato	cytosol, mitochondrion, peroxisome	29.68	66.67
VIT_14s0060g01700.t01	Wine grape	cytosol	53.77	54.7
Zm00001d029088_P002	Maize	mitochondrion	22.63	50.82
Bra004450.1-P	Field mustard	mitochondrion	56.69	49.79
KRH69267	Soybean	cytosol	55.47	49.03
AT2G47510.1	Thale cress	mitochondrion	58.39	48.78
KRH69266	Soybean	mitochondrion	55.96	46.46
VIT_07s0005g00880.t01	Wine grape	mitochondrion	55.47	46.15
GSMUA_Achr11P...	Banana	mitochondrion	55.47	45.78
Solyc09g075450.2.1	Tomato	plastid	54.26	45.14
TraesCS4D01G170200.1	Wheat	plastid	53.77	44.74
TraesCS4B01G167200.1	Wheat	golgi, unclear	53.53	44.53
TraesCS4A01G137100.1	Wheat	mitochondrion	53.53	44.53
Os03t0337900-01	Rice	mitochondrion	54.01	44.22
KXG39416	Sorghum	mitochondrion	53.53	44.18
Zm00001d029084_P001	Maize	mitochondrion	52.07	42.97
HORVU4Hr1G049590.3	Barley	plastid	53.53	41.2
KRH31845	Soybean	mitochondrion	55.47	40.86
KRH30057	Soybean	cytosol	8.03	40.74
Bra021400.1-P	Field mustard	mitochondrion	50.61	34.04
Zm00001d048743_P001	Maize	mitochondrion	12.41	18.21
VIT_14s0060g01690.t01	Wine grape	mitochondrion	0.24	1.08

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:2.3.7
Gene3D:3.40.50.800	InterPro:Anticodon-bd	InterPro:Anticodon-bd_dom_sf	EnsemblPlantsGene:Bra021413	EnsemblPlants:Bra021413.1	EnsemblPlants:Bra021413.1-P
InterPro:Fum_hydII	InterPro:Fumarase/histidase_N	InterPro:Fumarase_C_C	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam
GO:GO:0003674	GO:GO:0003824	GO:GO:0004333	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0006099	GO:GO:0006106	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016829	GO:GO:0045239	InterPro:IPR024083	InterPro:IPR036621	InterPro:L-Aspartase-like
UniProt:M4DY17	PFAM:PF00206	PFAM:PF03129	PFAM:PF10415	PRINTS:PR00149	ScanProsite:PS00163
PANTHER:PTHR11444	PANTHER:PTHR11444:SF1	SUPFAM:SSF48557	SUPFAM:SSF52954	UniParc:UPI0002544AF4	:

Description

AT2G47510 (E=6e-064) FUM1 | FUM1 (FUMARASE 1); catalytic/ fumarate hydratase

Coordinates

chrA01:-:25288060..25292365

Molecular Weight (calculated)

44415.4 Da

IEP (calculated)

8.578

GRAVY (calculated)

-0.193

Length

411 amino acids

Sequence
(BLAST)

001: MEYGLDTTIG KAIMQAAQEV AEGKLNDHFP LVIANRAAEI LGRQRGHAHT EINSRLIPSL KTLHSTLDSK SLEFKDIVKI GRTHTQDATP LILGQEFGGY
101: ATHFSKMFGQ LAQGGTAVGR GLNTKKERIA AAVAEETNLP FVTAENKFEA LAAHDACVET SGSLNTRSPM IYVFLEGIGP RCGLGELVLP ENEPGSSIMP
201: GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHK IGYDNAAAVA KKAYKEGSTL KGSAGGHLGP LFFYHHDHKH SGFQTNNNLR
301: SMRSPPAAPT KSGFLCKVVL STETQVLVSV TEENKLGEAA ELASQYIVNK RRGKHFDRAR CKGSEIPWMV IVGNTELSKG VVTLKKMVEW SEEEVKGVSR
401: DSFVAELLKR L

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.