Factsheet for Bra004450.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 10
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT2G47510.1	Thale cress	mitochondrion	97.44	92.68
CDX80112	Canola	mitochondrion	96.15	92.4
CDY57717	Canola	mitochondrion	95.09	92.13
KRH69267	Soybean	cytosol	83.76	84.3
VIT_07s0005g00880.t01	Wine grape	mitochondrion	87.82	83.2
KRH69266	Soybean	mitochondrion	87.82	83.03
VIT_14s0060g01700.t01	Wine grape	cytosol	70.51	81.68
Solyc09g075450.2.1	Tomato	plastid	84.83	80.36
TraesCS4A01G137100.1	Wheat	mitochondrion	82.91	78.54
TraesCS4B01G167200.1	Wheat	golgi, unclear	82.91	78.54
TraesCS4D01G170200.1	Wheat	plastid	82.69	78.34
KXG39416	Sorghum	mitochondrion	83.33	78.31
Solyc06g009830.2.1	Tomato	cytosol, mitochondrion, peroxisome	30.56	78.14
GSMUA_Achr11P...	Banana	mitochondrion	83.12	78.11
Os03t0337900-01	Rice	mitochondrion	83.76	78.09
Zm00001d029084_P001	Maize	mitochondrion	82.05	77.11
Zm00001d029088_P002	Maize	mitochondrion	29.27	74.86
KRH31845	Soybean	mitochondrion	88.03	73.84
HORVU4Hr1G049590.3	Barley	plastid	82.69	72.47
Bra021400.1-P	Field mustard	mitochondrion	78.63	60.23
Bra021413.1-P	Field mustard	cytosol	49.79	56.69
VIT_14s0060g01690.t01	Wine grape	mitochondrion	10.68	53.76
KRH30057	Soybean	cytosol	6.84	39.51
Zm00001d048743_P001	Maize	mitochondrion	23.5	39.29

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10
MapMan:2.3.7	EnsemblPlantsGene:Bra004450	EnsemblPlants:Bra004450.1	EnsemblPlants:Bra004450.1-P	InterPro:Fum_hydII	InterPro:Fumarase/histidase_N
InterPro:Fumarase_C_C	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam	GO:GO:0000003	GO:GO:0003674
GO:GO:0003824	GO:GO:0004333	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0006091	GO:GO:0006099	GO:GO:0006106	GO:GO:0006950	GO:GO:0006979
GO:GO:0008150	GO:GO:0008152	GO:GO:0009628	GO:GO:0009651	GO:GO:0009856	GO:GO:0009987
GO:GO:0016829	GO:GO:0045239	GO:GO:0048868	InterPro:IPR024083	InterPro:L-Aspartase-like	UniProt:M4CJR6
HAMAP:MF_00743	PFAM:PF00206	PFAM:PF10415	PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR11444
PANTHER:PTHR11444:SF1	SUPFAM:SSF48557	TIGRFAMs:TIGR00979	UniParc:UPI0002547FE1	SEG:seg	:

Description

AT2G47510 (E=2e-129) FUM1 | FUM1 (FUMARASE 1); catalytic/ fumarate hydratase

Coordinates

chrA05:-:173223..176202

Molecular Weight (calculated)

50567.5 Da

IEP (calculated)

8.030

GRAVY (calculated)

-0.196

Length

468 amino acids

Sequence
(BLAST)

001: MAIYVASRRL SARTTAATLR YATALRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHTTLD
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAI AAAVAEETNL PFVTAENKFE ALAAHDACVE TSGSLNTIAT
301: SLMKIANDIR FLGSGPRCGL GELVLPENEP GSSIMPGKVN PTQCEALTMV CAQVMGNHVA VTVGGSNGHF ELNVFKPVIA SALLHSVRLI ADASASFEKN
401: CVRGIEANRE RISKLLHEKI GYDNAAAVAK KAHKEGSTLK EAALKLGVLT SEEFDTLVVP EKMIGPSD

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.