CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY63850	Canola	cytosol	47.34	85.79
Solyc06g009830.2.1	Tomato	cytosol, mitochondrion, peroxisome	43.42	84.7
CDY27481	Canola	mitochondrion	98.88	72.48
CDY57717	Canola	mitochondrion	92.16	68.12
CDX80112	Canola	mitochondrion	92.16	67.56
Solyc09g075450.2.1	Tomato	plastid	86.55	62.55
CDY53742	Canola	cytosol, peroxisome, plastid	73.11	59.86
CDY53744	Canola	cytosol, nucleus, peroxisome	30.53	46.78
KRH30057	Soybean	cytosol	9.8	43.21
CDY57716	Canola	nucleus	5.6	20.0
CDY51426	Canola	mitochondrion	0.84	1.31
CDY67328	Canola	mitochondrion	0.28	0.62

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.10.40.30	Gene3D:1.20.200.10
MapMan:2.3.7	GO:A0A078INA8	UniProt:A0A078INA8	EnsemblPlants:CDY51427	ProteinID:CDY51427	ProteinID:CDY51427.1
InterPro:Fum_hydII	InterPro:Fumarase/histidase_N	InterPro:Fumarase_C_C	InterPro:Fumarate_lyase_CS	InterPro:Fumarate_lyase_N	InterPro:Fumarate_lyase_fam
GO:GO:0003674	GO:GO:0003824	GO:GO:0004333	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0006099	GO:GO:0006106	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016829	GO:GO:0045239	EnsemblPlantsGene:GSBRNA2T00003367001	InterPro:IPR024083	InterPro:L-Aspartase-like
PFAM:PF00206	PFAM:PF10415	PRINTS:PR00145	PRINTS:PR00149	ScanProsite:PS00163	PANTHER:PTHR11444
PANTHER:PTHR11444:SF1	MetaCyc:PWY-5392	MetaCyc:PWY-561	MetaCyc:PWY-5690	MetaCyc:PWY-5913	MetaCyc:PWY-6728
MetaCyc:PWY-6969	MetaCyc:PWY-7254	MetaCyc:PWY-7384	SUPFAM:SSF48557	UniPathway:UPA00223	UniParc:UPI0004EE41AE

Description

BnaA04g27040DBnaA04g27040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078INA8]

Coordinates

chrLK032993:+:62641..65356

Molecular Weight (calculated)

37983.7 Da

IEP (calculated)

7.343

GRAVY (calculated)

-0.055

Length

357 amino acids

Sequence
(BLAST)

001: MNANEVIANR AAEILGGDKC VHPNDHVNRS QSSNDTFPTV MHIAAATEIN SRLIPSLKTL HSTLHSKSFQ FKDIVKIGRT HTQDATPLTL GQEFGGYATQ
101: VKYGLNRVTC TLPRLYQLAQ GGTAVGTGLN TKKGFDVKIA AAVAEETNLP FVTAENKFEA LAAHDACVET SGSLNTIATS LMKIANDIRF LGSGPRCGLG
201: ELVLPENEPG SSIMPGKVNP TQCEALTMVC AQVMGNHVAV TVGGSNGHFE LNVFKPVIAS ALLHSIRLVA DASASFEKNC VRGIEANRER ISKLLHESLM
301: LVTSLNPKIG YDNAAAVAKK AHKEGSTLKE AALKLGVLTA EEFDTLVVPE KMIGPSD

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.