Factsheet for GSMUA_Achr1P09550_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	mitochondrion, plastid
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH63538	Soybean	cytosol, mitochondrion, nucleus	18.97	46.36
KRH72339	Soybean	cytosol, mitochondrion, nucleus	25.2	32.18
PGSC0003DMT400028972	Potato	mitochondrion	31.98	25.05
KRH63115	Soybean	mitochondrion	33.88	22.85
GSMUA_Achr3P28120_001	Banana	mitochondrion	41.19	15.78
Bra039230.1-P	Field mustard	plastid	38.21	14.4
Bra032120.1-P	Field mustard	plastid	36.59	14.36
Solyc07g005930.2.1	Tomato	nucleus	37.94	14.11
AT2G24120.1	Thale cress	plastid	37.94	14.1
KRH03007	Soybean	plastid	36.04	13.99
KRH54896	Soybean	plastid	36.31	13.77
GSMUA_Achr1P09530_001	Banana	mitochondrion	2.71	13.51
GSMUA_Achr1P09560_001	Banana	mitochondrion, nucleus, plastid	4.07	12.2
VIT_01s0010g03250.t01	Wine grape	cytosol	1.36	10.0
GSMUA_Achr1P15880_001	Banana	cytosol, mitochondrion, nucleus	39.02	8.15
CDY44514	Canola	cytosol	2.71	8.0
GSMUA_Achr1P09540_001	Banana	vacuole	1.63	2.59

Protein Annotations

KEGG:00230+2.7.7.6	KEGG:00240+2.7.7.6	Gene3D:1.10.150.20	MapMan:15.6.1.1	InterPro:DNA-dir_Rpol_phage-type	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0003899	GO:GO:0005488	GO:GO:0006139
GO:GO:0006351	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
EnsemblPlantsGene:GSMUA_Achr1G09550_001	EnsemblPlants:GSMUA_Achr1P09550_001	EnsemblPlants:GSMUA_Achr1T09550_001	UniProt:M0RYG4	PFAM:PF00940	ScanProsite:PS00489
PANTHER:PTHR10102	PANTHER:PTHR10102:SF1	SUPFAM:SSF56672	UniParc:UPI000296E277	SEG:seg	:

Description

Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G09550_001]

Coordinates

chr1:+:7318331..7320896

Molecular Weight (calculated)

41885.4 Da

IEP (calculated)

8.350

GRAVY (calculated)

-0.062

Length

369 amino acids

Sequence
(BLAST)

001: MVYKRSFINL SSVRPTLWHG TSFISLINLN FCTAQICHDC INLDLPSCAH YGFFYFDPSV LPLQIFLNVL MYSQPRFVVP YCTGVLTRTW YGTVPVYRGG
101: TSGCTERYTL VYRAVHPAVP DGPCTDNLSD RYVPPDTGGT LRYGRHCSQL SSQMNFNIIL SELDQHFPFF NFKLFFLSFK LLHCQVGAIS VNLIAGEKPA
201: DVYSEIAARV LGIMRRDADK DPTVNRDALR ARLLVDQVDR KLIKQTVMTS VYGVTYVGAR EQINRRLKER GLIADDTELF GASCYAAKTT LTALGEMFQA
301: ARSIMNWLGD CAKVRFVQFD VYSIRYRLHK RSSETDKENL KGIMQCSNDG MPSSCTSWVE SFNFGYIFD

Best Arabidopsis Sequence Match ( AT5G15700.1 )
(BLAST)

0001: MSSAQTPLFL ANQTKVFDHL IPLHKPFISS PNPVSQSFPM WRNIAKQAIS RSAARLNVSS QTRGLLVSSP ESIFSKNLSF RFPVLGSPCH GKGFRCLSGI
0101: TRREEFSKSE RCLSGTLARG YTSVAEEEVL STDVEEEPEV DELLKEMKKE KKRESHRSWR MKKQDQFGMG RTKFQNLWRR QVKIETEEWE RAAAEYMELL
0201: TDMCEQKLAP NLPYVKSLFL GWFEPLRDAI AKDQELYRLG KSKATYAHYL DQLPADKISV ITMHKLMGHL MTGGDNGCVK VVHAACTVGD AIEQEIRICT
0301: FLDKKKKGDD NEESGGVENE TSMKEQDKLR KKVNELIKKQ KLSAVRKILQ SHDYTKPWIA DVRAKVGSRL IELLVRTAYI QSPADQQDND LPDVRPAFVH
0401: TFKVAKGSMN SGRKYGVIEC DPLVRKGLEK SGRYAVMPYM PMLVPPLKWS GYDKGAYLFL TSYIMKTHGA KQQREALKSA PKGQLQPVFE ALDTLGSTKW
0501: RVNKRVLTVV DRIWSSGGCV ADMVDRSDVP LPEKPDTEDE GILKKWKWEV KSAKKVNSER HSQRCDTELK LSVARKMKDE EAFYYPHNMD FRGRAYPMPP
0601: HLNHLGSDLC RGVLEFAEGR PMGISGLRWL KIHLANLYAG GVDKLSLDGR LAFTENHLDD IFDSADRPLE GSRWWLQAED PFQCLAVCIS LTEALRSPSP
0701: ETVLSHIPIH QDGSCNGLQH YAALGRDTLG AEAVNLVAGE KPADVYSGIA TRVLDIMRRD ADRDPEVFPE ALRARKLLNQ VDRKLVKQTV MTSVYGVTYI
0801: GARDQIKRRL KERSDFGDEK EVFGAACYAA KVTLAAIDEM FQAARAIMRW FGECAKIIAS ENETVRWTTP LGLPVVQPYH QMGTKLVKTS LQTLSLQHET
0901: DQVIVRRQRT AFPPNFIHSL DGSHMMMTAV ACKRAGVCFA GVHDSFWTHA CDVDKLNIIL REKFVELYSQ PILENLLESF EQSFPHLDFP PLPERGDLDL
1001: KVVLDSPYFF N

Arabidopsis Description

DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL;Acc:F4KB75]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.