CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH72339	Soybean	cytosol, mitochondrion, nucleus	74.17	38.75
KRH45290	Soybean	cytosol, mitochondrion, nucleus	56.29	33.33
PGSC0003DMT400028972	Potato	mitochondrion	69.54	22.29
KRH63115	Soybean	mitochondrion	70.2	19.38
GSMUA_Achr1P09550_001	Banana	mitochondrion	46.36	18.97
KRH03007	Soybean	plastid	83.44	13.25
TraesCS7B01G411000.1	Wheat	nucleus	58.28	11.44
KRH54896	Soybean	plastid	71.52	11.1
Os06t0652000-01	Rice	plastid	58.94	11.04
Bra032120.1-P	Field mustard	plastid	67.55	10.85
Solyc07g005930.2.1	Tomato	nucleus	69.54	10.58
HORVU7Hr1G112980.9	Barley	mitochondrion, nucleus, plastid	59.6	10.53
Bra039230.1-P	Field mustard	plastid	66.89	10.32
AT2G24120.1	Thale cress	plastid	66.89	10.17
KRH07470	Soybean	cytosol, mitochondrion, nucleus	13.24	9.43
TraesCS7A01G503900.1	Wheat	plastid	58.28	9.27
EER88745	Sorghum	plastid	58.28	9.18
KRH01430	Soybean	plastid	62.25	8.99
Zm00001d046835_P002	Maize	plastid	58.94	8.98
KRH07469	Soybean	mitochondrion	47.68	8.98
KRH45146	Soybean	mitochondrion	62.25	8.88
VIT_01s0010g03250.t01	Wine grape	cytosol	1.99	6.0
Zm00001d044404_P001	Maize	mitochondrion	1.99	2.46
CDY44514	Canola	cytosol	1.99	2.4
Zm00001d034215_P001	Maize	mitochondrion	1.99	1.72
Zm00001d030829_P001	Maize	mitochondrion	1.99	1.5
Zm00001d014049_P001	Maize	mitochondrion	1.99	1.47
Zm00001d021198_P001	Maize	cytosol	1.99	1.23
Zm00001d023696_P001	Maize	plastid	1.99	1.19
Zm00001d045595_P001	Maize	cytosol, mitochondrion, nucleus	1.32	1.08
Zm00001d043127_P001	Maize	endoplasmic reticulum	1.99	0.94
KRH45285	Soybean	mitochondrion	3.31	0.72
Zm00001d043100_P001	Maize	endoplasmic reticulum, extracellular	0.66	0.54
Zm00001d007570_P001	Maize	cytosol	0.0	0.0
Zm00001d026323_P001	Maize	cytosol	0.0	0.0
Zm00001d035375_P002	Maize	mitochondrion, nucleus	0.0	0.0

Protein Annotations

KEGG:00230+2.7.7.6	KEGG:00240+2.7.7.6	Gene3D:1.10.150.20	MapMan:15.6.1.1	UniProt:A0A0R0KED1	EMBL:ACUP02002699
ncoils:Coil	InterPro:DNA-dir_Rpol_phage-type	EnsemblPlantsGene:GLYMA_04G183800	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677
GO:GO:0003824	GO:GO:0003899	GO:GO:0005488	GO:GO:0006139	GO:GO:0006351	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	EnsemblPlants:KRH63538	ProteinID:KRH63538
ProteinID:KRH63538.1	PFAM:PF00940	PANTHER:PTHR10102	PANTHER:PTHR10102:SF1	SUPFAM:SSF56672	UniParc:UPI0006EDA999

Description

hypothetical protein

Coordinates

chr4:+:45210473..45211935

Molecular Weight (calculated)

17112.1 Da

IEP (calculated)

8.604

GRAVY (calculated)

0.191

Length

151 amino acids

Sequence
(BLAST)

001: MEQFEYTLLG NWFYIRFHDG RTDPAAYPNA LLAKVLIDQI DRKLVKQTVR TSVYGVTFVG AREQIKRRLE EKGLITDEKL LFAAACYAAK VTLTALGEIF
101: GAARVIMGWL GDCAKVIAFE NQPVCWTTPL GLPVVQPYCK TERHLILILI Y

Best Arabidopsis Sequence Match ( AT1G68990.1 )
(BLAST)

001: MWRNILGRAS LRKVKFLSDS SSSGTHYPVN RVRGILSSVN LSGVRNGLSI NPVNEMGGLS SFRHGQCYVF EGYATAAQAI DSTDPEDESS GSDEVNELIT
101: EMEKETERIR KKARLAAIPP KRVIAGMGAQ KFYMLKQRQV KMETEEWERA ARECREILAD MCEQKLAPNL PYMKSLFLGW FEPVRNAIQD DLDTFKIKKG
201: KIPYAPFMEQ LPADKMAVIT MHKMMGLLMT NAEGVGIVKL VNAATQIGEA VEQEVRINSF LQKKNKKNAT DKTINTEAEN VSEEIVAKET EKARKQVTVL
301: MEKNKLRQVK ALVRKHDSFK PWGQEAQVKV GARLIQLLME NAYIQPPAEQ FDDGPPDIRP AFKQNFRTVT LENTKTSRRY GCIECDPLVL KGLDKSARHM
401: VIPYLPMLIP PQNWTGYDQG AHFFLPSYVM RTHGAKQQRT VMKRTPKEQL EPVYEALDTL GNTKWKINKK VLSLVDRIWA NGGRIGGLVD REDVPIPEEP
501: EREDQEKFKN WRWESKKAIK QNNERHSQRC DIELKLEVAR KMKDEEGFYY PHNVDFRGRA YPIHPYLNHL GSDLCRGILE FCEGKPLGKS GLRWLKIHIA
601: NLYAGGVDKL AYEDRIAFTE SHLEDIFDSS DRPLEGKRWW LNAEDPFQCL AACINLSEAL RSPFPEAAIS HIPIHQDGSC NGLQHYAALG RDKLGADAVN
701: LVTGEKPADV YTEIAARVLK IMQQDAEEDP ETFPNATYAK LMLDQVDRKL VKQTVMTSVY GVTYSGARDQ IKKRLKERGT FEDDSLTFHA SCYAAKITLK
801: ALEEMFEAAR AIKSWFGDCA KIIASENNAV CWTTPLGLPV VQPYRKPGRH LVKTTLQVLT LSRETDKVMA RRQMTAFAPN FIHSLDGSHM MMTAVACNRA
901: GLSFAGVHDS FWTHACDVDV MNTILREKFV ELYEKPILEN LLESFQKSFP DISFPPLPER GDFDLRKVLE STYFFN

Arabidopsis Description

MGP3DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL;Acc:F4I0I3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.