CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH45285	Soybean	mitochondrion	73.07	84.93
VIT_01s0010g00690.t01	Wine grape	mitochondrion	69.58	57.06
Os09t0246200-01	Rice	mitochondrion	63.97	53.94
Solyc05g010660.2.1	Tomato	mitochondrion	66.46	53.68
GSMUA_Achr3P28120_001	Banana	mitochondrion	62.59	52.13
TraesCS5A01G167300.2	Wheat	plastid	62.59	51.49
OQU90275	Sorghum	mitochondrion	62.34	51.23
Zm00001d022169_P001	Maize	mitochondrion	61.72	50.77
KRH63115	Soybean	mitochondrion	34.54	50.64
CDY33562	Canola	mitochondrion	60.22	50.37
TraesCS5B01G164300.1	Wheat	plastid	62.59	50.0
TraesCS5D01G171600.1	Wheat	plastid	62.47	49.9
CDX95968	Canola	mitochondrion	60.35	49.85
AT1G68990.2	Thale cress	mitochondrion	60.1	49.03
KRH01430	Soybean	plastid	62.72	48.09
KRH63538	Soybean	cytosol, mitochondrion, nucleus	8.98	47.68
CDY07360	Canola	mitochondrion	52.37	47.51
HORVU5Hr1G051530.5	Barley	mitochondrion	62.09	47.29
CDY04262	Canola	mitochondrion	53.62	46.94
KRH45146	Soybean	mitochondrion	61.47	46.6
KRH54896	Soybean	plastid	51.5	42.45
KRH03007	Soybean	plastid	50.0	42.17
KRH45290	Soybean	cytosol, mitochondrion, nucleus	11.97	37.65
CDY70786	Canola	cytosol, mitochondrion, nucleus	8.73	29.66
KRH72339	Soybean	cytosol, mitochondrion, nucleus	10.6	29.41
KRH07470	Soybean	cytosol, mitochondrion, nucleus	2.49	9.43
Bra027253.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	0.0	0.0

Protein Annotations

KEGG:00230+2.7.7.6	KEGG:00240+2.7.7.6	Gene3D:1.10.1320.10	Gene3D:1.10.150.20	Gene3D:1.10.287.260	Gene3D:1.10.287.280
MapMan:15.6.1.1	UniProt:A0A0R0FNB7	EMBL:ACUP02010017	InterPro:DNA-dir_RNA_pol_helix_hairp_sf	InterPro:DNA-dir_Rpol_phage-type	EnsemblPlantsGene:GLYMA_16G091400
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003824	GO:GO:0003899	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006139
GO:GO:0006351	GO:GO:0006390	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0016740	GO:GO:0016779	GO:GO:0034245	InterPro:IPR024075	InterPro:IPR037159	EnsemblPlants:KRH07469
ProteinID:KRH07469	ProteinID:KRH07469.1	PFAM:PF00940	PFAM:PF14700	ScanProsite:PS00489	ScanProsite:PS00900
PANTHER:PTHR10102	PANTHER:PTHR10102:SF1	InterPro:RNA_POL_N_sf	InterPro:RPOL_N	SMART:SM01311	SUPFAM:SSF56672
UniParc:UPI0006EDF7AB	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr16:+:14205984..14228205

Molecular Weight (calculated)

90997.0 Da

IEP (calculated)

8.491

GRAVY (calculated)

-0.528

Length

802 amino acids

Sequence
(BLAST)

001: MWTNLAKRAS STLRNNFRVS SLSPRFCKPQ TCKTFQGFPE VGVSQSKFVF HEGFSCSSSW SWSWMVLGRG HASVAEAIES TDTEDDYDEV QKLLEEMAKA
101: EHKVDSSSYK YKLLKRRQIE SETEAWAEAA REYGELLEDM RDKKLAPNLP YMKSLFLGWF EPLRNAILAD QDLCKDSKCR MSHAPYFNDL PADMMAVVTM
201: HKLMALLMTN ANGVGTARVI QAACQIGEAV ENEARIYQFM KREKENKSSH LAPVEQSGKL TEENGEMEQK QSRLRKRVAG LMKKQKKLQA MGIIGRQDDW
301: KTWGQEAQVK VGSRLMQLLI ETAYIQPPTN QIGDGPPDIH PAFRHTLRTL SNESQRETRR YGVIECDPLV QNGLEKSARH MVIPYMPMLV PPINWTGYDK
401: GAYLFLPSYV MRVHGAKQQR EAVKRAPKSQ LDPVFEALNT LGNTKWRVNK RVLCVIDQIW ANGGRLADLV DRENVPSPKE PDTIDEAEIR KWKWKVKAVK
501: KENSERHSQR CDIELKLAVA RKMKDEEAFY YPHNLDFRGR AYPMHPYLNH LGSDLCRGIL EFAEGRSLGK SGLRWLKIHL ANLYAGGVDK LSYDGRISFT
601: ENHLDDIFDS ADRPLEGKHW WLQAEDPFQC LAACINLSEA LRSPTPETTI SHMPVHQDGS CNGLQHYAAL GRDKLGAAAV NLVGGDQPAD VYSGIAARVL
701: EIMKRDAEKD PRTNPNALHA RRLISQVDRK LVKQTVMTSV YGVTYIGARD QIKRRLKERC AIEDDVELFA ASCYAAKTTL TALEEMFEAA RSIMGWLGDC
801: AK

Best Arabidopsis Sequence Match ( AT1G68990.1 )
(BLAST)

001: MWRNILGRAS LRKVKFLSDS SSSGTHYPVN RVRGILSSVN LSGVRNGLSI NPVNEMGGLS SFRHGQCYVF EGYATAAQAI DSTDPEDESS GSDEVNELIT
101: EMEKETERIR KKARLAAIPP KRVIAGMGAQ KFYMLKQRQV KMETEEWERA ARECREILAD MCEQKLAPNL PYMKSLFLGW FEPVRNAIQD DLDTFKIKKG
201: KIPYAPFMEQ LPADKMAVIT MHKMMGLLMT NAEGVGIVKL VNAATQIGEA VEQEVRINSF LQKKNKKNAT DKTINTEAEN VSEEIVAKET EKARKQVTVL
301: MEKNKLRQVK ALVRKHDSFK PWGQEAQVKV GARLIQLLME NAYIQPPAEQ FDDGPPDIRP AFKQNFRTVT LENTKTSRRY GCIECDPLVL KGLDKSARHM
401: VIPYLPMLIP PQNWTGYDQG AHFFLPSYVM RTHGAKQQRT VMKRTPKEQL EPVYEALDTL GNTKWKINKK VLSLVDRIWA NGGRIGGLVD REDVPIPEEP
501: EREDQEKFKN WRWESKKAIK QNNERHSQRC DIELKLEVAR KMKDEEGFYY PHNVDFRGRA YPIHPYLNHL GSDLCRGILE FCEGKPLGKS GLRWLKIHIA
601: NLYAGGVDKL AYEDRIAFTE SHLEDIFDSS DRPLEGKRWW LNAEDPFQCL AACINLSEAL RSPFPEAAIS HIPIHQDGSC NGLQHYAALG RDKLGADAVN
701: LVTGEKPADV YTEIAARVLK IMQQDAEEDP ETFPNATYAK LMLDQVDRKL VKQTVMTSVY GVTYSGARDQ IKKRLKERGT FEDDSLTFHA SCYAAKITLK
801: ALEEMFEAAR AIKSWFGDCA KIIASENNAV CWTTPLGLPV VQPYRKPGRH LVKTTLQVLT LSRETDKVMA RRQMTAFAPN FIHSLDGSHM MMTAVACNRA
901: GLSFAGVHDS FWTHACDVDV MNTILREKFV ELYEKPILEN LLESFQKSFP DISFPPLPER GDFDLRKVLE STYFFN

Arabidopsis Description

MGP3DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL;Acc:F4I0I3]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.