Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45290 | Soybean | cytosol, mitochondrion, nucleus | 71.19 | 65.88 |
| KRH07470 | Soybean | cytosol, mitochondrion, nucleus | 41.53 | 46.23 |
| CDY33562 | Canola | mitochondrion | 92.8 | 22.84 |
| Bra004354.1-P | Field mustard | mitochondrion | 92.8 | 22.55 |
| CDX95968 | Canola | mitochondrion | 92.8 | 22.55 |
| CDY04262 | Canola | mitochondrion | 81.78 | 21.07 |
| CDX69507 | Canola | mitochondrion | 38.98 | 20.96 |
| CDY07360 | Canola | mitochondrion | 76.69 | 20.48 |
| AT1G68990.2 | Thale cress | mitochondrion | 84.32 | 20.24 |
| GSMUA_Achr3P28120_001 | Banana | mitochondrion | 72.03 | 17.65 |
| VIT_01s0010g00690.t01 | Wine grape | mitochondrion | 71.19 | 17.18 |
| OQU90275 | Sorghum | mitochondrion | 70.34 | 17.01 |
| Zm00001d022169_P001 | Maize | mitochondrion | 69.92 | 16.92 |
| Solyc05g010660.2.1 | Tomato | mitochondrion | 71.19 | 16.92 |
| TraesCS5A01G167300.2 | Wheat | plastid | 69.49 | 16.82 |
| TraesCS5B01G164300.1 | Wheat | plastid | 71.19 | 16.73 |
| TraesCS5D01G171600.1 | Wheat | plastid | 70.76 | 16.63 |
| CDY34797 | Canola | plastid | 66.95 | 16.46 |
| CDX76837 | Canola | plastid | 67.37 | 16.37 |
| CDX90977 | Canola | plastid | 69.92 | 16.34 |
| CDY39695 | Canola | plastid | 66.95 | 16.24 |
| CDX85538 | Canola | plastid | 69.49 | 16.24 |
| CDY20283 | Canola | plastid | 66.95 | 16.19 |
| CDY26454 | Canola | plastid | 68.22 | 16.05 |
| HORVU5Hr1G051530.5 | Barley | mitochondrion | 70.76 | 15.86 |
| Os09t0246200-01 | Rice | mitochondrion | 57.2 | 14.2 |
| KRH07469 | Soybean | mitochondrion | 29.66 | 8.73 |
| CDY44514 | Canola | cytosol | 1.27 | 2.4 |
| KRH45285 | Soybean | mitochondrion | 0.85 | 0.29 |
Protein Annotations
| KEGG:00230+2.7.7.6 | KEGG:00240+2.7.7.6 | Gene3D:1.10.150.20 | MapMan:15.6.1.1 | GO:A0A078JZ27 | UniProt:A0A078JZ27 |
| EnsemblPlants:CDY70786 | ProteinID:CDY70786 | ProteinID:CDY70786.1 | InterPro:DNA-dir_Rpol_phage-type | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0003899 | GO:GO:0005488 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016740 | EnsemblPlantsGene:GSBRNA2T00007516001 |
| PFAM:PF00940 | ScanProsite:PS00489 | PANTHER:PTHR10102 | PANTHER:PTHR10102:SF0 | SUPFAM:SSF56672 | UniParc:UPI0004EEC0D4 |
| SEG:seg | : | : | : | : | : |
Description
BnaAnng35030DBnaAnng35030D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JZ27]
Coordinates
chrLK043324:+:1300..2640
Molecular Weight (calculated)
26960.5 Da
IEP (calculated)
8.205
GRAVY (calculated)
-0.202
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQDAEEDPE TFPNATYAKL MLDQVDRKLV KQTVMTSVYG VTYSGARDQI KKRLKERGAF ADDSQNFHAS CYAARVTLKA LEEMFEAARA IMSWFGECAK
101: IIASQNKAVC WTTPLGLPVV QPYRKNERHL VKTTLQVLTL QRETEKVMAR KQMTAFAPNF VHSLDGSHMM MTAVACNKAG LSFAGVHDSF WTHACDVELM
201: NNILREKFVE LYDKPILENV IASPYYIFAY SYHFFL
101: IIASQNKAVC WTTPLGLPVV QPYRKNERHL VKTTLQVLTL QRETEKVMAR KQMTAFAPNF VHSLDGSHMM MTAVACNKAG LSFAGVHDSF WTHACDVELM
201: NNILREKFVE LYDKPILENV IASPYYIFAY SYHFFL
001: MWRNILGRAS LRKVKFLSDS SSSGTHYPVN RVRGILSSVN LSGVRNGLSI NPVNEMGGLS SFRHGQCYVF EGYATAAQAI DSTDPEDESS GSDEVNELIT
101: EMEKETERIR KKARLAAIPP KRVIAGMGAQ KFYMLKQRQV KMETEEWERA ARECREILAD MCEQKLAPNL PYMKSLFLGW FEPVRNAIQD DLDTFKIKKG
201: KIPYAPFMEQ LPADKMAVIT MHKMMGLLMT NAEGVGIVKL VNAATQIGEA VEQEVRINSF LQKKNKKNAT DKTINTEAEN VSEEIVAKET EKARKQVTVL
301: MEKNKLRQVK ALVRKHDSFK PWGQEAQVKV GARLIQLLME NAYIQPPAEQ FDDGPPDIRP AFKQNFRTVT LENTKTSRRY GCIECDPLVL KGLDKSARHM
401: VIPYLPMLIP PQNWTGYDQG AHFFLPSYVM RTHGAKQQRT VMKRTPKEQL EPVYEALDTL GNTKWKINKK VLSLVDRIWA NGGRIGGLVD REDVPIPEEP
501: EREDQEKFKN WRWESKKAIK QNNERHSQRC DIELKLEVAR KMKDEEGFYY PHNVDFRGRA YPIHPYLNHL GSDLCRGILE FCEGKPLGKS GLRWLKIHIA
601: NLYAGGVDKL AYEDRIAFTE SHLEDIFDSS DRPLEGKRWW LNAEDPFQCL AACINLSEAL RSPFPEAAIS HIPIHQDGSC NGLQHYAALG RDKLGADAVN
701: LVTGEKPADV YTEIAARVLK IMQQDAEEDP ETFPNATYAK LMLDQVDRKL VKQTVMTSVY GVTYSGARDQ IKKRLKERGT FEDDSLTFHA SCYAAKITLK
801: ALEEMFEAAR AIKSWFGDCA KIIASENNAV CWTTPLGLPV VQPYRKPGRH LVKTTLQVLT LSRETDKVMA RRQMTAFAPN FIHSLDGSHM MMTAVACNRA
901: GLSFAGVHDS FWTHACDVDV MNTILREKFV ELYEKPILEN LLESFQKSFP DISFPPLPER GDFDLRKVLE STYFFN
101: EMEKETERIR KKARLAAIPP KRVIAGMGAQ KFYMLKQRQV KMETEEWERA ARECREILAD MCEQKLAPNL PYMKSLFLGW FEPVRNAIQD DLDTFKIKKG
201: KIPYAPFMEQ LPADKMAVIT MHKMMGLLMT NAEGVGIVKL VNAATQIGEA VEQEVRINSF LQKKNKKNAT DKTINTEAEN VSEEIVAKET EKARKQVTVL
301: MEKNKLRQVK ALVRKHDSFK PWGQEAQVKV GARLIQLLME NAYIQPPAEQ FDDGPPDIRP AFKQNFRTVT LENTKTSRRY GCIECDPLVL KGLDKSARHM
401: VIPYLPMLIP PQNWTGYDQG AHFFLPSYVM RTHGAKQQRT VMKRTPKEQL EPVYEALDTL GNTKWKINKK VLSLVDRIWA NGGRIGGLVD REDVPIPEEP
501: EREDQEKFKN WRWESKKAIK QNNERHSQRC DIELKLEVAR KMKDEEGFYY PHNVDFRGRA YPIHPYLNHL GSDLCRGILE FCEGKPLGKS GLRWLKIHIA
601: NLYAGGVDKL AYEDRIAFTE SHLEDIFDSS DRPLEGKRWW LNAEDPFQCL AACINLSEAL RSPFPEAAIS HIPIHQDGSC NGLQHYAALG RDKLGADAVN
701: LVTGEKPADV YTEIAARVLK IMQQDAEEDP ETFPNATYAK LMLDQVDRKL VKQTVMTSVY GVTYSGARDQ IKKRLKERGT FEDDSLTFHA SCYAAKITLK
801: ALEEMFEAAR AIKSWFGDCA KIIASENNAV CWTTPLGLPV VQPYRKPGRH LVKTTLQVLT LSRETDKVMA RRQMTAFAPN FIHSLDGSHM MMTAVACNRA
901: GLSFAGVHDS FWTHACDVDV MNTILREKFV ELYEKPILEN LLESFQKSFP DISFPPLPER GDFDLRKVLE STYFFN
Arabidopsis Description
MGP3DNA-directed RNA polymerase [Source:UniProtKB/TrEMBL;Acc:F4I0I3]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.