Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P01440_001 | Banana | mitochondrion | 76.02 | 97.39 |
| GSMUA_Achr6P09860_001 | Banana | mitochondrion | 77.04 | 94.97 |
| GSMUA_Achr8P18300_001 | Banana | mitochondrion | 72.45 | 92.81 |
| Os11t0151300-01 | Rice | nucleus, plasma membrane, plastid | 67.86 | 86.93 |
| Os12t0150100-01 | Rice | golgi, plasma membrane, plastid | 66.33 | 86.67 |
| VIT_07s0129g00090.t01 | Wine grape | cytosol, mitochondrion | 63.78 | 85.62 |
| VIT_07s0129g00160.t01 | Wine grape | cytosol, mitochondrion | 63.78 | 85.62 |
| Zm00001d008594_P001 | Maize | mitochondrion | 68.37 | 85.35 |
| Zm00001d039908_P001 | Maize | plastid | 68.37 | 85.35 |
| Solyc03g044000.1.1 | Tomato | nucleus | 63.27 | 84.93 |
| PGSC0003DMT400023405 | Potato | cytosol, mitochondrion | 63.27 | 84.93 |
| TraesCS3B01G158400.1 | Wheat | mitochondrion, plastid | 67.86 | 84.71 |
| TraesCS3A01G313500.1 | Wheat | nucleus | 67.86 | 84.71 |
| EES02512 | Sorghum | mitochondrion | 67.86 | 84.71 |
| TraesCS3D01G140800.1 | Wheat | golgi, unclear | 67.35 | 84.08 |
| HORVU3Hr1G026880.1 | Barley | mitochondrion, plastid | 67.35 | 84.08 |
| PGSC0003DMT400055191 | Potato | cytosol, mitochondrion | 61.73 | 82.88 |
| KRH28357 | Soybean | cytosol, mitochondrion | 61.73 | 82.88 |
| KRH10767 | Soybean | cytosol, mitochondrion | 61.22 | 82.19 |
| Solyc02g092430.1.1 | Tomato | nucleus | 61.22 | 82.19 |
| KRH77124 | Soybean | mitochondrion | 61.22 | 82.19 |
| PGSC0003DMT400085766 | Potato | cytosol, mitochondrion | 60.71 | 81.51 |
| KRH21509 | Soybean | nucleus | 60.71 | 81.51 |
| KRH21559 | Soybean | nucleus | 60.71 | 81.51 |
| Solyc02g064670.1.1 | Tomato | nucleus, unclear | 60.2 | 80.82 |
| AT5G67510.1 | Thale cress | cytosol, plastid | 60.2 | 80.82 |
| CDY02104 | Canola | cytosol, mitochondrion | 59.18 | 79.45 |
| AT3G49910.1 | Thale cress | cytosol, mitochondrion | 59.18 | 79.45 |
| Bra029984.1-P | Field mustard | cytosol, mitochondrion | 59.18 | 79.45 |
| Bra036038.1-P | Field mustard | cytosol, mitochondrion | 59.18 | 79.45 |
| CDY70622 | Canola | cytosol, mitochondrion | 59.18 | 79.45 |
| VIT_14s0006g02470.t01 | Wine grape | cytosol | 69.39 | 79.07 |
| CDY23029 | Canola | cytosol, mitochondrion | 53.57 | 78.95 |
| CDX68557 | Canola | cytosol, mitochondrion | 53.57 | 78.95 |
| CDY17740 | Canola | extracellular | 58.67 | 78.77 |
| Bra012916.1-P | Field mustard | cytosol, mitochondrion | 58.67 | 78.77 |
| CDY30618 | Canola | cytosol, mitochondrion | 53.06 | 78.2 |
| Zm00001d041360_P001 | Maize | cytosol | 26.02 | 77.27 |
| Zm00001d040875_P001 | Maize | mitochondrion | 45.41 | 71.2 |
| Zm00001d005753_P001 | Maize | mitochondrion | 45.41 | 71.2 |
| Zm00001d032087_P001 | Maize | mitochondrion | 44.9 | 70.4 |
| Zm00001d004528_P001 | Maize | plastid | 29.08 | 64.77 |
| KRH17569 | Soybean | mitochondrion | 38.78 | 62.81 |
| KRH00041 | Soybean | nucleus | 44.9 | 62.41 |
| Zm00001d049904_P001 | Maize | plastid | 49.49 | 59.51 |
| KRH57594 | Soybean | mitochondrion | 30.1 | 58.42 |
| Os01t0140500-01 | Rice | plasma membrane | 30.1 | 45.74 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 44.39 | 41.23 |
Protein Annotations
| MapMan:17.1.2.1.26 | Gene3D:2.30.30.30 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr10G19730_001 |
| EnsemblPlants:GSMUA_Achr10P19730_001 | EnsemblPlants:GSMUA_Achr10T19730_001 | InterPro:IPR014722 | InterPro:KOW | UniProt:M0RJP8 | HAMAP:MF_01326_A |
| PFAM:PF00467 | PFAM:PF16906 | ScanProsite:PS01108 | PANTHER:PTHR11143 | PANTHER:PTHR11143:SF13 | InterPro:Rib_L2_dom2 |
| InterPro:Ribosomal_L24/26_CS | InterPro:Ribosomal_L26/L24P_euk/arc | SMART:SM00739 | SUPFAM:SSF50104 | TIGRFAMs:TIGR01080 | InterPro:Translation_prot_SH3-like_sf |
| UniParc:UPI0002969C82 | SEG:seg | : | : | : | : |
Description
60S ribosomal protein L26-2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G19730_001]
Coordinates
chr10:+:25996260..25997040
Molecular Weight (calculated)
21839.4 Da
IEP (calculated)
11.149
GRAVY (calculated)
-0.449
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSSSLETLD FHCFLYIPSF SSLAEFLFRN PIAPRSPQPA TMKYNPRVSS SRRKCRKAHF TAPSSVRRVL MSAPLSADLR NKYNVRSVPV RKDDEVQVVR
101: GTFKGREGKV VQVYRRKWVI HVERIAREKV NGSTVNVGIN PSKVVITKLK LDKDRKALLD RKARGRAADK AKGKFSADEV AAAAAAAGAP SLQEID
101: GTFKGREGKV VQVYRRKWVI HVERIAREKV NGSTVNVGIN PSKVVITKLK LDKDRKALLD RKARGRAADK AKGKFSADEV AAAAAAAGAP SLQEID
001: MKFNPRVSSS RRKNRKAHFT APSSVRRVLM SSPLSKDLRN KHNVRSMPIR KDDEVQVVRG TFKGREGKVM QVYRRKWVIH IERITREKVN GSTVNVGVNA
101: SNVMITKLRL DKDRKSLLER KANGRAAADK EKGTKFSAED VMENVD
101: SNVMITKLRL DKDRKSLLER KANGRAAADK EKGTKFSAED VMENVD
Arabidopsis Description
RPL26B60S ribosomal protein L26-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX2]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.