CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 4
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57594	Soybean	mitochondrion	57.85	69.31
KRH77124	Soybean	mitochondrion	82.64	68.49
KRH28357	Soybean	cytosol, mitochondrion	81.82	67.81
KRH10767	Soybean	cytosol, mitochondrion	78.51	65.07
KRH21559	Soybean	nucleus	77.69	64.38
KRH21509	Soybean	nucleus	76.86	63.7
Solyc03g044000.1.1	Tomato	nucleus	73.55	60.96
PGSC0003DMT400023405	Potato	cytosol, mitochondrion	73.55	60.96
VIT_07s0129g00160.t01	Wine grape	cytosol, mitochondrion	72.73	60.27
VIT_07s0129g00090.t01	Wine grape	cytosol, mitochondrion	72.73	60.27
Solyc02g064670.1.1	Tomato	nucleus, unclear	71.9	59.59
PGSC0003DMT400085766	Potato	cytosol, mitochondrion	71.9	59.59
PGSC0003DMT400055191	Potato	cytosol, mitochondrion	70.25	58.22
AT5G67510.1	Thale cress	cytosol, plastid	69.42	57.53
Solyc02g092430.1.1	Tomato	nucleus	69.42	57.53
AT3G49910.1	Thale cress	cytosol, mitochondrion	68.59	56.85
Bra029984.1-P	Field mustard	cytosol, mitochondrion	66.94	55.48
Bra036038.1-P	Field mustard	cytosol, mitochondrion	66.94	55.48
CDY02104	Canola	cytosol, mitochondrion	66.94	55.48
CDY70622	Canola	cytosol, mitochondrion	66.94	55.48
CDX68557	Canola	cytosol, mitochondrion	60.33	54.89
CDY30618	Canola	cytosol, mitochondrion	60.33	54.89
CDY23029	Canola	cytosol, mitochondrion	60.33	54.89
Bra012916.1-P	Field mustard	cytosol, mitochondrion	66.12	54.79
CDY17740	Canola	extracellular	66.12	54.79
KRH00041	Soybean	nucleus	63.64	54.61
Os12t0150100-01	Rice	golgi, plasma membrane, plastid	65.29	52.67
Os11t0151300-01	Rice	nucleus, plasma membrane, plastid	66.12	52.29
GSMUA_Achr8P18300_001	Banana	mitochondrion	65.29	51.63
GSMUA_Achr3P01440_001	Banana	mitochondrion	64.46	50.98
TraesCS3A01G313500.1	Wheat	nucleus	65.29	50.32
TraesCS3B01G158400.1	Wheat	mitochondrion, plastid	65.29	50.32
TraesCS3D01G140800.1	Wheat	golgi, unclear	65.29	50.32
HORVU3Hr1G026880.1	Barley	mitochondrion, plastid	65.29	50.32
EES02512	Sorghum	mitochondrion	64.46	49.68
Zm00001d039908_P001	Maize	plastid	64.46	49.68
Zm00001d008594_P001	Maize	mitochondrion	64.46	49.68
GSMUA_Achr6P09860_001	Banana	mitochondrion	62.81	47.8
Zm00001d005753_P001	Maize	mitochondrion	47.93	46.4
Zm00001d032087_P001	Maize	mitochondrion	47.11	45.6
Zm00001d040875_P001	Maize	mitochondrion	47.11	45.6
Zm00001d041360_P001	Maize	cytosol	23.97	43.94
GSMUA_Achr10P...	Banana	cytosol	62.81	38.78
Zm00001d049904_P001	Maize	plastid	51.24	38.04
Zm00001d004528_P001	Maize	plastid	23.97	32.95
Os01t0140500-01	Rice	plasma membrane	32.23	30.23
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	42.15	24.17

Protein Annotations

Gene3D:2.30.30.30	MapMan:35.1	EMBL:ACUP02007817	EnsemblPlantsGene:GLYMA_13G001400	GO:GO:0002181	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538
GO:GO:0022625	GO:GO:0042273	InterPro:IPR014722	UniProt:K7LY80	EnsemblPlants:KRH17569	ProteinID:KRH17569
ProteinID:KRH17569.1	PFAM:PF16906	PANTHER:PTHR11143	PANTHER:PTHR11143:SF13	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L26/L24P_euk/arc
SUPFAM:SSF50104	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI000295C7DF	:	:	:

Description

hypothetical protein

Coordinates

chr13:+:474104..474498

Molecular Weight (calculated)

13813.8 Da

IEP (calculated)

10.908

GRAVY (calculated)

-0.584

Length

121 amino acids

Sequence
(BLAST)

001: MKFNPRVSLS RRKSHNVHFI VPSSVRRVLM STSLSIDLRS KYNVRSISVR KDDEWVIHIE HITREKVNAN VGIHPSKIDV TKLRMDKGSK SLLDRKAKGC
101: ATADKEKGTK FAPEDIMETV N

Best Arabidopsis Sequence Match ( AT3G49910.1 )
(BLAST)

001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD

Arabidopsis Description

RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.