CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d008594_P001	Maize	mitochondrion	98.73	98.73
Zm00001d039908_P001	Maize	plastid	97.45	97.45
HORVU3Hr1G026880.1	Barley	mitochondrion, plastid	97.45	97.45
TraesCS3D01G140800.1	Wheat	golgi, unclear	97.45	97.45
TraesCS3A01G313500.1	Wheat	nucleus	96.82	96.82
TraesCS3B01G158400.1	Wheat	mitochondrion, plastid	96.82	96.82
Os12t0150100-01	Rice	golgi, plasma membrane, plastid	90.45	94.67
Os11t0151300-01	Rice	nucleus, plasma membrane, plastid	90.45	92.81
Zm00001d041360_P001	Maize	cytosol	37.58	89.39
GSMUA_Achr6P09860_001	Banana	mitochondrion	86.62	85.53
GSMUA_Achr3P01440_001	Banana	mitochondrion	82.8	84.97
GSMUA_Achr8P18300_001	Banana	mitochondrion	82.17	84.31
Solyc03g044000.1.1	Tomato	nucleus	77.07	82.88
PGSC0003DMT400023405	Potato	cytosol, mitochondrion	77.07	82.88
KRH28357	Soybean	cytosol, mitochondrion	77.07	82.88
KRH77124	Soybean	mitochondrion	76.43	82.19
KRH10767	Soybean	cytosol, mitochondrion	76.43	82.19
KRH21509	Soybean	nucleus	75.16	80.82
Solyc02g064670.1.1	Tomato	nucleus, unclear	75.16	80.82
KRH21559	Soybean	nucleus	75.16	80.82
Zm00001d005753_P001	Maize	mitochondrion	64.33	80.8
Zm00001d040875_P001	Maize	mitochondrion	64.33	80.8
PGSC0003DMT400055191	Potato	cytosol, mitochondrion	74.52	80.14
PGSC0003DMT400085766	Potato	cytosol, mitochondrion	74.52	80.14
Zm00001d032087_P001	Maize	mitochondrion	63.69	80.0
AT3G49910.1	Thale cress	cytosol, mitochondrion	73.89	79.45
CDY70622	Canola	cytosol, mitochondrion	73.89	79.45
Bra029984.1-P	Field mustard	cytosol, mitochondrion	73.89	79.45
Bra036038.1-P	Field mustard	cytosol, mitochondrion	73.89	79.45
Solyc02g092430.1.1	Tomato	nucleus	73.89	79.45
CDY02104	Canola	cytosol, mitochondrion	73.89	79.45
Bra012916.1-P	Field mustard	cytosol, mitochondrion	73.25	78.77
CDY17740	Canola	extracellular	73.25	78.77
CDX68557	Canola	cytosol, mitochondrion	66.24	78.2
CDY23029	Canola	cytosol, mitochondrion	66.24	78.2
CDY30618	Canola	cytosol, mitochondrion	65.61	77.44
AT5G67510.1	Thale cress	cytosol, plastid	70.7	76.03
Zm00001d004528_P001	Maize	plastid	40.76	72.73
GSMUA_Achr10P...	Banana	cytosol	84.71	67.86
KRH17569	Soybean	mitochondrion	49.68	64.46
Zm00001d049904_P001	Maize	plastid	66.88	64.42
KRH00041	Soybean	nucleus	57.32	63.83
VIT_01s0010g03220.t01	Wine grape	cytosol	21.66	61.82
KRH57594	Soybean	mitochondrion	35.67	55.45
Os01t0140500-01	Rice	plasma membrane	42.04	51.16
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	49.68	36.97

Protein Annotations

MapMan:17.1.2.1.26	Gene3D:2.30.30.30	EntrezGene:8073332	UniProt:C5XQP0	EnsemblPlants:EES02512	ProteinID:EES02512
ProteinID:EES02512.1	GO:GO:0002181	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735
GO:GO:0005198	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009987	GO:GO:0015934	GO:GO:0019538	GO:GO:0022625	GO:GO:0042273	InterPro:IPR014722
InterPro:KOW	HAMAP:MF_01326_A	PFAM:PF00467	PFAM:PF16906	ScanProsite:PS01108	PANTHER:PTHR11143
PANTHER:PTHR11143:SF13	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L24/26_CS	InterPro:Ribosomal_L26/L24P_euk/arc	SMART:SM00739	EnsemblPlantsGene:SORBI_3003G078200
SUPFAM:SSF50104	unigene:Sbi.14774	TIGRFAMs:TIGR01080	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI0001A84B4E	RefSeq:XP_002457392.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:6728769..6729604

Molecular Weight (calculated)

17557.3 Da

IEP (calculated)

11.710

GRAVY (calculated)

-0.660

Length

157 amino acids

Sequence
(BLAST)

001: MKRNPRVTSS RRKCRKAHFT APSSVRRVLM SAALSTELRH KYNVRSIPIR KDDEVQVVRG TYKGREGKVV QVYRRRWVIH VERITREKVN GSTVNVGIHP
101: SKVIVTKLKL DKDRKALLDR KARGRNADKA KGKFTADDVA AAAGGAAATG ASLQEID

Best Arabidopsis Sequence Match ( AT3G49910.1 )
(BLAST)

001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD

Arabidopsis Description

RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.