Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
22065420
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d040875_P001 | Maize | mitochondrion | 68.1 | 88.8 |
| Zm00001d005753_P001 | Maize | mitochondrion | 67.48 | 88.0 |
| Zm00001d032087_P001 | Maize | mitochondrion | 66.87 | 87.2 |
| Zm00001d041360_P001 | Maize | cytosol | 34.36 | 84.85 |
| Zm00001d004528_P001 | Maize | plastid | 38.65 | 71.59 |
| Os12t0150100-01 | Rice | golgi, plasma membrane, plastid | 62.58 | 68.0 |
| Zm00001d039908_P001 | Maize | plastid | 65.03 | 67.52 |
| TraesCS3A01G313500.1 | Wheat | nucleus | 64.42 | 66.88 |
| EES02512 | Sorghum | mitochondrion | 64.42 | 66.88 |
| Os11t0151300-01 | Rice | nucleus, plasma membrane, plastid | 62.58 | 66.67 |
| KRH28357 | Soybean | cytosol, mitochondrion | 59.51 | 66.44 |
| KRH77124 | Soybean | mitochondrion | 59.51 | 66.44 |
| TraesCS3B01G158400.1 | Wheat | mitochondrion, plastid | 63.8 | 66.24 |
| TraesCS3D01G140800.1 | Wheat | golgi, unclear | 63.8 | 66.24 |
| Zm00001d008594_P001 | Maize | mitochondrion | 63.8 | 66.24 |
| HORVU3Hr1G026880.1 | Barley | mitochondrion, plastid | 63.8 | 66.24 |
| KRH10767 | Soybean | cytosol, mitochondrion | 58.9 | 65.75 |
| KRH21509 | Soybean | nucleus | 58.28 | 65.07 |
| KRH21559 | Soybean | nucleus | 57.67 | 64.38 |
| GSMUA_Achr8P18300_001 | Banana | mitochondrion | 60.12 | 64.05 |
| VIT_01s0010g03220.t01 | Wine grape | cytosol | 21.47 | 63.64 |
| Solyc03g044000.1.1 | Tomato | nucleus | 56.44 | 63.01 |
| PGSC0003DMT400023405 | Potato | cytosol, mitochondrion | 56.44 | 63.01 |
| GSMUA_Achr3P01440_001 | Banana | mitochondrion | 58.9 | 62.75 |
| PGSC0003DMT400085766 | Potato | cytosol, mitochondrion | 55.83 | 62.33 |
| Solyc02g064670.1.1 | Tomato | nucleus, unclear | 55.21 | 61.64 |
| PGSC0003DMT400055191 | Potato | cytosol, mitochondrion | 55.21 | 61.64 |
| GSMUA_Achr6P09860_001 | Banana | mitochondrion | 59.51 | 61.01 |
| Solyc02g092430.1.1 | Tomato | nucleus | 54.6 | 60.96 |
| KRH00041 | Soybean | nucleus | 52.15 | 60.28 |
| AT3G49910.1 | Thale cress | cytosol, mitochondrion | 53.99 | 60.27 |
| Bra036038.1-P | Field mustard | cytosol, mitochondrion | 53.37 | 59.59 |
| CDY02104 | Canola | cytosol, mitochondrion | 53.37 | 59.59 |
| AT5G67510.1 | Thale cress | cytosol, plastid | 53.37 | 59.59 |
| Bra029984.1-P | Field mustard | cytosol, mitochondrion | 53.37 | 59.59 |
| Bra012916.1-P | Field mustard | cytosol, mitochondrion | 53.37 | 59.59 |
| CDY17740 | Canola | extracellular | 53.37 | 59.59 |
| CDY70622 | Canola | cytosol, mitochondrion | 53.37 | 59.59 |
| CDY23029 | Canola | cytosol, mitochondrion | 46.63 | 57.14 |
| CDX68557 | Canola | cytosol, mitochondrion | 46.63 | 57.14 |
| CDY30618 | Canola | cytosol, mitochondrion | 46.01 | 56.39 |
| Os01t0140500-01 | Rice | plasma membrane | 41.1 | 51.94 |
| KRH17569 | Soybean | mitochondrion | 38.04 | 51.24 |
| GSMUA_Achr10P... | Banana | cytosol | 59.51 | 49.49 |
| KRH57594 | Soybean | mitochondrion | 24.54 | 39.6 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 41.1 | 31.75 |
Protein Annotations
| MapMan:17.1.2.1.26 | Gene3D:2.30.30.30 | ProteinID:AQK51557.1 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 |
| InterPro:IPR014722 | UniProt:K7TYB0 | InterPro:KOW | PFAM:PF00467 | PFAM:PF16906 | ScanProsite:PS01108 |
| PANTHER:PTHR11143 | PANTHER:PTHR11143:SF13 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L24/26_CS | InterPro:Ribosomal_L26/L24P_euk/arc | SMART:SM00739 |
| SUPFAM:SSF50104 | TIGRFAMs:TIGR01080 | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI0002211673 | EnsemblPlantsGene:Zm00001d049904 | EnsemblPlants:Zm00001d049904_P001 |
| EnsemblPlants:Zm00001d049904_T001 | SEG:seg | : | : | : | : |
Description
60S ribosomal protein L26-1
Coordinates
chr4:-:51553890..51554381
Molecular Weight (calculated)
18425.8 Da
IEP (calculated)
12.220
GRAVY (calculated)
-0.545
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRNPRVTSS RRKCRKAHFT APSSVRRVLM SAGLSTELRH KYNMRSIPIR KDDEVQVVRG TFKGREGKVV QVYRRCWIIH VERITREKVN GSTVNVGIHP
101: SKVIVTKLKL DKDHKALLDR KAGAAPPTKL RASLLPTTSP RPPLAPPPPA PLSRRSTRLF TVI
101: SKVIVTKLKL DKDHKALLDR KAGAAPPTKL RASLLPTTSP RPPLAPPPPA PLSRRSTRLF TVI
001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
Arabidopsis Description
RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.