Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G140800.1 | Wheat | golgi, unclear | 99.36 | 99.36 |
| HORVU3Hr1G026880.1 | Barley | mitochondrion, plastid | 99.36 | 99.36 |
| TraesCS3A01G313500.1 | Wheat | nucleus | 98.73 | 98.73 |
| Zm00001d008594_P001 | Maize | mitochondrion | 96.82 | 96.82 |
| EES02512 | Sorghum | mitochondrion | 96.82 | 96.82 |
| Os12t0150100-01 | Rice | golgi, plasma membrane, plastid | 91.72 | 96.0 |
| Zm00001d039908_P001 | Maize | plastid | 95.54 | 95.54 |
| Os11t0151300-01 | Rice | nucleus, plasma membrane, plastid | 91.72 | 94.12 |
| Zm00001d041360_P001 | Maize | cytosol | 36.94 | 87.88 |
| GSMUA_Achr3P01440_001 | Banana | mitochondrion | 84.08 | 86.27 |
| GSMUA_Achr8P18300_001 | Banana | mitochondrion | 83.44 | 85.62 |
| GSMUA_Achr6P09860_001 | Banana | mitochondrion | 86.62 | 85.53 |
| Solyc03g044000.1.1 | Tomato | nucleus | 78.98 | 84.93 |
| PGSC0003DMT400023405 | Potato | cytosol, mitochondrion | 78.98 | 84.93 |
| KRH10767 | Soybean | cytosol, mitochondrion | 77.71 | 83.56 |
| KRH28357 | Soybean | cytosol, mitochondrion | 77.71 | 83.56 |
| Solyc02g064670.1.1 | Tomato | nucleus, unclear | 77.07 | 82.88 |
| KRH77124 | Soybean | mitochondrion | 77.07 | 82.88 |
| PGSC0003DMT400055191 | Potato | cytosol, mitochondrion | 76.43 | 82.19 |
| PGSC0003DMT400085766 | Potato | cytosol, mitochondrion | 76.43 | 82.19 |
| KRH21509 | Soybean | nucleus | 76.43 | 82.19 |
| KRH21559 | Soybean | nucleus | 76.43 | 82.19 |
| Solyc02g092430.1.1 | Tomato | nucleus | 75.8 | 81.51 |
| Bra029984.1-P | Field mustard | cytosol, mitochondrion | 74.52 | 80.14 |
| AT3G49910.1 | Thale cress | cytosol, mitochondrion | 74.52 | 80.14 |
| Bra036038.1-P | Field mustard | cytosol, mitochondrion | 74.52 | 80.14 |
| CDY02104 | Canola | cytosol, mitochondrion | 74.52 | 80.14 |
| CDY70622 | Canola | cytosol, mitochondrion | 74.52 | 80.14 |
| Zm00001d005753_P001 | Maize | mitochondrion | 63.69 | 80.0 |
| Zm00001d040875_P001 | Maize | mitochondrion | 63.69 | 80.0 |
| Bra012916.1-P | Field mustard | cytosol, mitochondrion | 73.89 | 79.45 |
| CDY17740 | Canola | extracellular | 73.89 | 79.45 |
| Zm00001d032087_P001 | Maize | mitochondrion | 63.06 | 79.2 |
| CDX68557 | Canola | cytosol, mitochondrion | 66.88 | 78.95 |
| CDY23029 | Canola | cytosol, mitochondrion | 66.88 | 78.95 |
| CDY30618 | Canola | cytosol, mitochondrion | 66.24 | 78.2 |
| AT5G67510.1 | Thale cress | cytosol, plastid | 71.97 | 77.4 |
| Zm00001d004528_P001 | Maize | plastid | 40.76 | 72.73 |
| GSMUA_Achr10P... | Banana | cytosol | 84.71 | 67.86 |
| KRH17569 | Soybean | mitochondrion | 50.32 | 65.29 |
| KRH00041 | Soybean | nucleus | 57.32 | 63.83 |
| Zm00001d049904_P001 | Maize | plastid | 66.24 | 63.8 |
| VIT_01s0010g03220.t01 | Wine grape | cytosol | 21.66 | 61.82 |
| KRH57594 | Soybean | mitochondrion | 36.94 | 57.43 |
| Os01t0140500-01 | Rice | plasma membrane | 43.31 | 52.71 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 49.68 | 36.97 |
Protein Annotations
| MapMan:17.1.2.1.26 | Gene3D:2.30.30.30 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | InterPro:IPR014722 |
| InterPro:KOW | HAMAP:MF_01326_A | PFAM:PF00467 | PFAM:PF16906 | ScanProsite:PS01108 | PANTHER:PTHR11143 |
| PANTHER:PTHR11143:SF13 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L24/26_CS | InterPro:Ribosomal_L26/L24P_euk/arc | SMART:SM00739 | SUPFAM:SSF50104 |
| TIGRFAMs:TIGR01080 | EnsemblPlantsGene:TraesCS3B01G158400 | EnsemblPlants:TraesCS3B01G158400.1 | InterPro:Translation_prot_SH3-like_sf | TIGR:cd06089 | SEG:seg |
Description
No Description!
Coordinates
chr3B:-:153667729..153668202
Molecular Weight (calculated)
17514.3 Da
IEP (calculated)
11.710
GRAVY (calculated)
-0.627
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRNPRVTSS RRKCRKAHFT APSSVRRVLM SAALSSELRH KYNVRSIPIR KDDEVQVVRG TYKGREGKVV QVYRRRWVIH VERITREKVN GSTVNVGIHP
101: SKVIVTKLKL DKDRKALLDR KARGRAADKA KGKFTAEDVA AAAGGATAAG ASLQEID
101: SKVIVTKLKL DKDRKALLDR KARGRAADKA KGKFTAEDVA AAAGGATAAG ASLQEID
001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
Arabidopsis Description
RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.