CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
cytosol 1
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH17569	Soybean	mitochondrion	69.31	57.85
KRH77124	Soybean	mitochondrion	74.26	51.37
KRH28357	Soybean	cytosol, mitochondrion	73.27	50.68
KRH21559	Soybean	nucleus	72.28	50.0
KRH10767	Soybean	cytosol, mitochondrion	72.28	50.0
KRH21509	Soybean	nucleus	71.29	49.32
VIT_07s0129g00160.t01	Wine grape	cytosol, mitochondrion	69.31	47.95
VIT_07s0129g00090.t01	Wine grape	cytosol, mitochondrion	69.31	47.95
CDX68557	Canola	cytosol, mitochondrion	61.39	46.62
CDY23029	Canola	cytosol, mitochondrion	61.39	46.62
CDY30618	Canola	cytosol, mitochondrion	61.39	46.62
AT5G67510.1	Thale cress	cytosol, plastid	66.34	45.89
Solyc03g044000.1.1	Tomato	nucleus	65.35	45.21
PGSC0003DMT400023405	Potato	cytosol, mitochondrion	65.35	45.21
AT3G49910.1	Thale cress	cytosol, mitochondrion	64.36	44.52
Bra036038.1-P	Field mustard	cytosol, mitochondrion	63.37	43.84
Solyc02g064670.1.1	Tomato	nucleus, unclear	63.37	43.84
Bra029984.1-P	Field mustard	cytosol, mitochondrion	63.37	43.84
CDY02104	Canola	cytosol, mitochondrion	63.37	43.84
CDY70622	Canola	cytosol, mitochondrion	63.37	43.84
CDY17740	Canola	extracellular	62.38	43.15
Bra012916.1-P	Field mustard	cytosol, mitochondrion	62.38	43.15
PGSC0003DMT400055191	Potato	cytosol, mitochondrion	62.38	43.15
PGSC0003DMT400085766	Potato	cytosol, mitochondrion	62.38	43.15
Solyc02g092430.1.1	Tomato	nucleus	62.38	43.15
GSMUA_Achr8P18300_001	Banana	mitochondrion	61.39	40.52
GSMUA_Achr3P01440_001	Banana	mitochondrion	61.39	40.52
Os12t0150100-01	Rice	golgi, plasma membrane, plastid	57.43	38.67
KRH00041	Soybean	nucleus	53.47	38.3
Os11t0151300-01	Rice	nucleus, plasma membrane, plastid	57.43	37.91
GSMUA_Achr6P09860_001	Banana	mitochondrion	59.41	37.74
TraesCS3A01G313500.1	Wheat	nucleus	57.43	36.94
TraesCS3D01G140800.1	Wheat	golgi, unclear	57.43	36.94
TraesCS3B01G158400.1	Wheat	mitochondrion, plastid	57.43	36.94
HORVU3Hr1G026880.1	Barley	mitochondrion, plastid	57.43	36.94
Zm00001d039908_P001	Maize	plastid	56.44	36.31
Zm00001d008594_P001	Maize	mitochondrion	56.44	36.31
EES02512	Sorghum	mitochondrion	55.45	35.67
Zm00001d041360_P001	Maize	cytosol	22.77	34.85
Zm00001d040875_P001	Maize	mitochondrion	37.62	30.4
Zm00001d005753_P001	Maize	mitochondrion	37.62	30.4
GSMUA_Achr10P...	Banana	cytosol	58.42	30.1
Zm00001d032087_P001	Maize	mitochondrion	36.63	29.6
Zm00001d004528_P001	Maize	plastid	24.75	28.41
Zm00001d049904_P001	Maize	plastid	39.6	24.54
Os01t0140500-01	Rice	plasma membrane	28.71	22.48
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	42.57	20.38

Protein Annotations

Gene3D:2.30.30.30	MapMan:35.1	EMBL:ACUP02002861	EnsemblPlantsGene:GLYMA_05G070800	GO:GO:0002181	GO:GO:0003674
GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0005840	GO:GO:0006412
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015934	GO:GO:0019538
GO:GO:0022625	GO:GO:0042273	InterPro:IPR014722	UniProt:K7KNB2	EnsemblPlants:KRH57594	ProteinID:KRH57594
ProteinID:KRH57594.1	PFAM:PF16906	PANTHER:PTHR11143	PANTHER:PTHR11143:SF13	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L26/L24P_euk/arc
UniParc:UPI000295B34F	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:-:7524996..7525390

Molecular Weight (calculated)

11917.7 Da

IEP (calculated)

11.276

GRAVY (calculated)

-0.458

Length

101 amino acids

Sequence
(BLAST)

001: MKFNPRVSLS PRKSHKAHFI VLLSVRYVLM RAPFSIDLQS KYNVWSILVY HRKWVIRIDH ITREKVNDHK SLLNRKAKGR AAAIKEKGTK FSPEDIKQSV
101: Y

Best Arabidopsis Sequence Match ( AT3G49910.1 )
(BLAST)

001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD

Arabidopsis Description

RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.