Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30618 | Canola | cytosol, mitochondrion | 36.97 | 58.65 |
| CDY23029 | Canola | cytosol, mitochondrion | 36.49 | 57.89 |
| CDX68557 | Canola | cytosol, mitochondrion | 36.49 | 57.89 |
| VIT_07s0129g00160.t01 | Wine grape | cytosol, mitochondrion | 39.34 | 56.85 |
| VIT_07s0129g00090.t01 | Wine grape | cytosol, mitochondrion | 39.34 | 56.85 |
| GSMUA_Achr3P01440_001 | Banana | mitochondrion | 40.76 | 56.21 |
| GSMUA_Achr8P18300_001 | Banana | mitochondrion | 40.76 | 56.21 |
| PGSC0003DMT400023405 | Potato | cytosol, mitochondrion | 37.91 | 54.79 |
| KRH21559 | Soybean | nucleus | 37.91 | 54.79 |
| KRH21509 | Soybean | nucleus | 37.91 | 54.79 |
| KRH10767 | Soybean | cytosol, mitochondrion | 37.91 | 54.79 |
| GSMUA_Achr6P09860_001 | Banana | mitochondrion | 41.23 | 54.72 |
| Solyc03g044000.1.1 | Tomato | nucleus | 37.44 | 54.11 |
| Solyc02g092430.1.1 | Tomato | nucleus | 36.97 | 53.42 |
| PGSC0003DMT400055191 | Potato | cytosol, mitochondrion | 36.97 | 53.42 |
| AT5G67510.1 | Thale cress | cytosol, plastid | 36.97 | 53.42 |
| KRH77124 | Soybean | mitochondrion | 36.97 | 53.42 |
| KRH28357 | Soybean | cytosol, mitochondrion | 36.97 | 53.42 |
| AT3G49910.1 | Thale cress | cytosol, mitochondrion | 36.97 | 53.42 |
| Bra012916.1-P | Field mustard | cytosol, mitochondrion | 36.49 | 52.74 |
| Bra029984.1-P | Field mustard | cytosol, mitochondrion | 36.49 | 52.74 |
| Bra036038.1-P | Field mustard | cytosol, mitochondrion | 36.49 | 52.74 |
| CDY70622 | Canola | cytosol, mitochondrion | 36.49 | 52.74 |
| PGSC0003DMT400085766 | Potato | cytosol, mitochondrion | 36.49 | 52.74 |
| CDY02104 | Canola | cytosol, mitochondrion | 36.49 | 52.74 |
| Solyc02g064670.1.1 | Tomato | nucleus, unclear | 36.02 | 52.05 |
| CDY17740 | Canola | extracellular | 36.02 | 52.05 |
| Os12t0150100-01 | Rice | golgi, plasma membrane, plastid | 36.97 | 52.0 |
| Os11t0151300-01 | Rice | nucleus, plasma membrane, plastid | 36.97 | 50.98 |
| Zm00001d041360_P001 | Maize | cytosol | 15.64 | 50.0 |
| EES02512 | Sorghum | mitochondrion | 36.97 | 49.68 |
| TraesCS3A01G313500.1 | Wheat | nucleus | 36.97 | 49.68 |
| TraesCS3B01G158400.1 | Wheat | mitochondrion, plastid | 36.97 | 49.68 |
| TraesCS3D01G140800.1 | Wheat | golgi, unclear | 36.97 | 49.68 |
| HORVU3Hr1G026880.1 | Barley | mitochondrion, plastid | 36.97 | 49.68 |
| Zm00001d008594_P001 | Maize | mitochondrion | 36.97 | 49.68 |
| Zm00001d039908_P001 | Maize | plastid | 36.97 | 49.68 |
| Zm00001d040875_P001 | Maize | mitochondrion | 28.44 | 48.0 |
| Zm00001d005753_P001 | Maize | mitochondrion | 28.44 | 48.0 |
| Zm00001d032087_P001 | Maize | mitochondrion | 27.96 | 47.2 |
| VIT_14s0006g02470.t01 | Wine grape | cytosol | 38.39 | 47.09 |
| Zm00001d004528_P001 | Maize | plastid | 18.96 | 45.45 |
| GSMUA_Achr10P... | Banana | cytosol | 41.23 | 44.39 |
| KRH57594 | Soybean | mitochondrion | 20.38 | 42.57 |
| KRH17569 | Soybean | mitochondrion | 24.17 | 42.15 |
| Zm00001d049904_P001 | Maize | plastid | 31.75 | 41.1 |
| KRH00041 | Soybean | nucleus | 27.01 | 40.43 |
| Os01t0140500-01 | Rice | plasma membrane | 16.11 | 26.36 |
Protein Annotations
| MapMan:17.1.2.1.26 | Gene3D:2.30.30.30 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr10G14300_001 |
| EnsemblPlants:GSMUA_Achr10P14300_001 | EnsemblPlants:GSMUA_Achr10T14300_001 | InterPro:IPR014722 | UniProt:M0RI56 | PFAM:PF16906 | PANTHER:PTHR11143 |
| PANTHER:PTHR11143:SF13 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L26/L24P_euk/arc | SUPFAM:SSF50104 | TIGRFAMs:TIGR01080 | InterPro:Translation_prot_SH3-like_sf |
| UniParc:UPI000295525D | SEG:seg | : | : | : | : |
Description
60S ribosomal protein L26-2 [Source:GMGC_GENE;Acc:GSMUA_Achr10G14300_001]
Coordinates
chr10:+:22615075..22615710
Molecular Weight (calculated)
24053.0 Da
IEP (calculated)
11.532
GRAVY (calculated)
-1.067
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYNPRVSGS RWKCRKEHFT APSSVRRVLM SALLSADGVT STTRGRSRCA RTKRCRWRRG THKGRDGKIV QVYRRKWVIH VERITREKVN GTTVKVNINL
101: CKVVITKLKL DKYRKAHGKF SAEKVVAGAP SLQEDNRSHG YDQGSADEMF LSLRSCKEVL NEKTNAAKKT SRTIPKKTKR KTAEEGPEKG SSNSHRGKPW
201: KKNSRTNGRE S
101: CKVVITKLKL DKYRKAHGKF SAEKVVAGAP SLQEDNRSHG YDQGSADEMF LSLRSCKEVL NEKTNAAKKT SRTIPKKTKR KTAEEGPEKG SSNSHRGKPW
201: KKNSRTNGRE S
001: MKFNPRVSSS RRKNRKAHFT APSSVRRVLM SSPLSKDLRN KHNVRSMPIR KDDEVQVVRG TFKGREGKVM QVYRRKWVIH IERITREKVN GSTVNVGVNA
101: SNVMITKLRL DKDRKSLLER KANGRAAADK EKGTKFSAED VMENVD
101: SNVMITKLRL DKDRKSLLER KANGRAAADK EKGTKFSAED VMENVD
Arabidopsis Description
RPL26B60S ribosomal protein L26-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX2]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.