Subcellular Localization
min:
: max
Winner_takes_all: cytosol, mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 3
- mitochondrion 4
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g044000.1.1 | Tomato | nucleus | 99.32 | 99.32 |
| PGSC0003DMT400055191 | Potato | cytosol, mitochondrion | 93.84 | 93.84 |
| PGSC0003DMT400085766 | Potato | cytosol, mitochondrion | 93.15 | 93.15 |
| KRH28357 | Soybean | cytosol, mitochondrion | 91.1 | 91.1 |
| KRH77124 | Soybean | mitochondrion | 90.41 | 90.41 |
| VIT_07s0129g00160.t01 | Wine grape | cytosol, mitochondrion | 89.73 | 89.73 |
| VIT_07s0129g00090.t01 | Wine grape | cytosol, mitochondrion | 89.73 | 89.73 |
| KRH10767 | Soybean | cytosol, mitochondrion | 89.04 | 89.04 |
| KRH21509 | Soybean | nucleus | 87.67 | 87.67 |
| KRH21559 | Soybean | nucleus | 87.67 | 87.67 |
| CDX68557 | Canola | cytosol, mitochondrion | 77.4 | 84.96 |
| CDY23029 | Canola | cytosol, mitochondrion | 77.4 | 84.96 |
| CDY70622 | Canola | cytosol, mitochondrion | 84.93 | 84.93 |
| CDY02104 | Canola | cytosol, mitochondrion | 84.93 | 84.93 |
| Bra036038.1-P | Field mustard | cytosol, mitochondrion | 84.93 | 84.93 |
| Bra029984.1-P | Field mustard | cytosol, mitochondrion | 84.93 | 84.93 |
| CDY17740 | Canola | extracellular | 84.25 | 84.25 |
| Bra012916.1-P | Field mustard | cytosol, mitochondrion | 84.25 | 84.25 |
| AT3G49910.1 | Thale cress | cytosol, mitochondrion | 84.25 | 84.25 |
| CDY30618 | Canola | cytosol, mitochondrion | 76.71 | 84.21 |
| AT5G67510.1 | Thale cress | cytosol, plastid | 83.56 | 83.56 |
| GSMUA_Achr8P18300_001 | Banana | mitochondrion | 86.3 | 82.35 |
| GSMUA_Achr3P01440_001 | Banana | mitochondrion | 86.3 | 82.35 |
| Os12t0150100-01 | Rice | golgi, plasma membrane, plastid | 83.56 | 81.33 |
| Os11t0151300-01 | Rice | nucleus, plasma membrane, plastid | 84.25 | 80.39 |
| HORVU3Hr1G026880.1 | Barley | mitochondrion, plastid | 84.93 | 78.98 |
| TraesCS3B01G158400.1 | Wheat | mitochondrion, plastid | 84.93 | 78.98 |
| TraesCS3D01G140800.1 | Wheat | golgi, unclear | 84.93 | 78.98 |
| Zm00001d041360_P001 | Maize | cytosol | 35.62 | 78.79 |
| GSMUA_Achr6P09860_001 | Banana | mitochondrion | 85.62 | 78.62 |
| TraesCS3A01G313500.1 | Wheat | nucleus | 84.25 | 78.34 |
| Zm00001d008594_P001 | Maize | mitochondrion | 83.56 | 77.71 |
| Zm00001d039908_P001 | Maize | plastid | 83.56 | 77.71 |
| EES02512 | Sorghum | mitochondrion | 82.88 | 77.07 |
| KRH17569 | Soybean | mitochondrion | 60.96 | 73.55 |
| Zm00001d005753_P001 | Maize | mitochondrion | 61.64 | 72.0 |
| Zm00001d040875_P001 | Maize | mitochondrion | 60.27 | 70.4 |
| Zm00001d032087_P001 | Maize | mitochondrion | 59.59 | 69.6 |
| KRH00041 | Soybean | nucleus | 65.75 | 68.09 |
| KRH57594 | Soybean | mitochondrion | 45.21 | 65.35 |
| Zm00001d004528_P001 | Maize | plastid | 38.36 | 63.64 |
| GSMUA_Achr10P... | Banana | cytosol | 84.93 | 63.27 |
| Zm00001d049904_P001 | Maize | plastid | 63.01 | 56.44 |
| Os01t0140500-01 | Rice | plasma membrane | 43.15 | 48.84 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 54.79 | 37.91 |
Protein Annotations
| EntrezGene:102596561 | MapMan:17.1.2.1.26 | Gene3D:2.30.30.30 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 |
| InterPro:IPR014722 | InterPro:KOW | UniProt:M1AIA5 | HAMAP:MF_01326_A | PFAM:PF00467 | PFAM:PF16906 |
| EnsemblPlantsGene:PGSC0003DMG400009063 | PGSC:PGSC0003DMG400009063 | EnsemblPlants:PGSC0003DMT400023405 | ScanProsite:PS01108 | PANTHER:PTHR11143 | PANTHER:PTHR11143:SF13 |
| InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L24/26_CS | InterPro:Ribosomal_L26/L24P_euk/arc | SMART:SM00739 | SUPFAM:SSF50104 | TIGRFAMs:TIGR01080 |
| InterPro:Translation_prot_SH3-like_sf | UniParc:UPI000295EAC2 | RefSeq:XP_006350614.1 | SEG:seg | : | : |
Description
L24 ribosomal protein [Source:PGSC_GENE;Acc:PGSC0003DMG400009063]
Coordinates
chr3:+:6876533..6877296
Molecular Weight (calculated)
16728.4 Da
IEP (calculated)
11.467
GRAVY (calculated)
-0.814
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MKYNPRVSSS RRKSRKAHFT APSSVRRVLM SAPLSSELRT KYNVRSIPVR KDDEVQVVRG TYKGREGKVM QVYRKKWVIH IERITREKVN GSTVNVGINP
101: SKVVVTKLRL DKDRKSLLDR KAKGRAAADK DKGTKFTAEE VMQTID
101: SKVVVTKLRL DKDRKSLLDR KAKGRAAADK DKGTKFTAEE VMQTID
001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
Arabidopsis Description
RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [cytosol,mitochondrion]
SUBAcon: [cytosol,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.