Factsheet for Os11t0151300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

nucleus: 19621931
plasma membrane: 27800704
plastid: 27992503

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0150100-01	Rice	golgi, plasma membrane, plastid	97.39	99.33
TraesCS3B01G158400.1	Wheat	mitochondrion, plastid	94.12	91.72
TraesCS3D01G140800.1	Wheat	golgi, unclear	93.46	91.08
Zm00001d008594_P001	Maize	mitochondrion	93.46	91.08
HORVU3Hr1G026880.1	Barley	mitochondrion, plastid	93.46	91.08
Zm00001d039908_P001	Maize	plastid	92.81	90.45
TraesCS3A01G313500.1	Wheat	nucleus	92.81	90.45
EES02512	Sorghum	mitochondrion	92.81	90.45
Zm00001d041360_P001	Maize	cytosol	37.25	86.36
GSMUA_Achr3P01440_001	Banana	mitochondrion	86.27	86.27
KRH10767	Soybean	cytosol, mitochondrion	81.05	84.93
Solyc03g044000.1.1	Tomato	nucleus	80.39	84.25
KRH28357	Soybean	cytosol, mitochondrion	80.39	84.25
PGSC0003DMT400023405	Potato	cytosol, mitochondrion	80.39	84.25
GSMUA_Achr6P09860_001	Banana	mitochondrion	86.93	83.65
KRH77124	Soybean	mitochondrion	79.74	83.56
KRH21559	Soybean	nucleus	79.74	83.56
KRH21509	Soybean	nucleus	79.74	83.56
GSMUA_Achr8P18300_001	Banana	mitochondrion	83.01	83.01
Solyc02g064670.1.1	Tomato	nucleus, unclear	78.43	82.19
PGSC0003DMT400085766	Potato	cytosol, mitochondrion	77.78	81.51
PGSC0003DMT400055191	Potato	cytosol, mitochondrion	77.78	81.51
Solyc02g092430.1.1	Tomato	nucleus	77.12	80.82
AT3G49910.1	Thale cress	cytosol, mitochondrion	75.82	79.45
Bra036038.1-P	Field mustard	cytosol, mitochondrion	75.82	79.45
Bra029984.1-P	Field mustard	cytosol, mitochondrion	75.82	79.45
CDY02104	Canola	cytosol, mitochondrion	75.82	79.45
CDY70622	Canola	cytosol, mitochondrion	75.82	79.45
CDX68557	Canola	cytosol, mitochondrion	68.63	78.95
CDY23029	Canola	cytosol, mitochondrion	68.63	78.95
CDY17740	Canola	extracellular	75.16	78.77
Bra012916.1-P	Field mustard	cytosol, mitochondrion	75.16	78.77
Zm00001d005753_P001	Maize	mitochondrion	64.05	78.4
Zm00001d040875_P001	Maize	mitochondrion	64.05	78.4
CDY30618	Canola	cytosol, mitochondrion	67.97	78.2
Zm00001d032087_P001	Maize	mitochondrion	63.4	77.6
AT5G67510.1	Thale cress	cytosol, plastid	71.9	75.34
Zm00001d004528_P001	Maize	plastid	40.52	70.45
GSMUA_Achr10P...	Banana	cytosol	86.93	67.86
KRH17569	Soybean	mitochondrion	52.29	66.12
KRH00041	Soybean	nucleus	59.48	64.54
Zm00001d049904_P001	Maize	plastid	66.67	62.58
VIT_01s0010g03220.t01	Wine grape	cytosol	20.91	58.18
KRH57594	Soybean	mitochondrion	37.91	57.43
Os01t0140500-01	Rice	plasma membrane	44.44	52.71
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, nucleus, plastid	50.98	36.97

Protein Annotations

MapMan:17.1.2.1.26	Gene3D:2.30.30.30	EntrezGene:4349791	ProteinID:AAX94834.1	ProteinID:BAT12715.1	ProteinID:EAZ17457.1
GO:GO:0002181	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003735	GO:GO:0005198
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015934	GO:GO:0019538	GO:GO:0022625	GO:GO:0042273	InterPro:IPR014722	InterPro:KOW
HAMAP:MF_01326_A	EnsemblPlantsGene:Os11g0151300	EnsemblPlants:Os11t0151300-01	PFAM:PF00467	PFAM:PF16906	ScanProsite:PS01108
PANTHER:PTHR11143	PANTHER:PTHR11143:SF13	UniProt:Q53Q51	InterPro:Rib_L2_dom2	InterPro:Ribosomal_L24/26_CS	InterPro:Ribosomal_L26/L24P_euk/arc
SMART:SM00739	SUPFAM:SSF50104	TIGRFAMs:TIGR01080	InterPro:Translation_prot_SH3-like_sf	UniParc:UPI000050918E	RefSeq:XP_015617829.1
SEG:seg	:	:	:	:	:

Description

Similar to 60S ribosomal protein L26-1. (Os11t0151300-01)

Coordinates

chr11:-:2382462..2383247

Molecular Weight (calculated)

17116.8 Da

IEP (calculated)

11.620

GRAVY (calculated)

-0.635

Length

153 amino acids

Sequence
(BLAST)

001: MKRNPRVTSS RRKCRKAHFT APSSVRRVLM SAALSTELRH KYNVRSIPVR KDDEVQVVRG SYKGREGKVV QVYRRRWVIH VERITREKVN GSTVNVGIHP
101: SKVVVTKLKL DKDRKAILDR KASGRAADKA KGKFTAEDVA AAGAAGASLQ EID

Best Arabidopsis Sequence Match ( AT3G49910.1 )
(BLAST)

001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD

Arabidopsis Description

RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.