Subcellular Localization
min:
: max
Winner_takes_all: golgi, unclear
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| golgi:
25769308
unclear: 25769308 |
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU3Hr1G026880.1 | Barley | mitochondrion, plastid | 100.0 | 100.0 |
| TraesCS3B01G158400.1 | Wheat | mitochondrion, plastid | 99.36 | 99.36 |
| TraesCS3A01G313500.1 | Wheat | nucleus | 99.36 | 99.36 |
| Zm00001d008594_P001 | Maize | mitochondrion | 97.45 | 97.45 |
| EES02512 | Sorghum | mitochondrion | 97.45 | 97.45 |
| Zm00001d039908_P001 | Maize | plastid | 96.18 | 96.18 |
| Os12t0150100-01 | Rice | golgi, plasma membrane, plastid | 91.08 | 95.33 |
| Os11t0151300-01 | Rice | nucleus, plasma membrane, plastid | 91.08 | 93.46 |
| Zm00001d041360_P001 | Maize | cytosol | 36.94 | 87.88 |
| GSMUA_Achr3P01440_001 | Banana | mitochondrion | 83.44 | 85.62 |
| GSMUA_Achr8P18300_001 | Banana | mitochondrion | 83.44 | 85.62 |
| Solyc03g044000.1.1 | Tomato | nucleus | 78.98 | 84.93 |
| PGSC0003DMT400023405 | Potato | cytosol, mitochondrion | 78.98 | 84.93 |
| GSMUA_Achr6P09860_001 | Banana | mitochondrion | 85.99 | 84.91 |
| KRH28357 | Soybean | cytosol, mitochondrion | 77.71 | 83.56 |
| KRH10767 | Soybean | cytosol, mitochondrion | 77.71 | 83.56 |
| KRH77124 | Soybean | mitochondrion | 77.07 | 82.88 |
| Solyc02g064670.1.1 | Tomato | nucleus, unclear | 77.07 | 82.88 |
| PGSC0003DMT400055191 | Potato | cytosol, mitochondrion | 76.43 | 82.19 |
| PGSC0003DMT400085766 | Potato | cytosol, mitochondrion | 76.43 | 82.19 |
| KRH21509 | Soybean | nucleus | 76.43 | 82.19 |
| KRH21559 | Soybean | nucleus | 76.43 | 82.19 |
| Solyc02g092430.1.1 | Tomato | nucleus | 75.8 | 81.51 |
| CDY02104 | Canola | cytosol, mitochondrion | 74.52 | 80.14 |
| AT3G49910.1 | Thale cress | cytosol, mitochondrion | 74.52 | 80.14 |
| Bra029984.1-P | Field mustard | cytosol, mitochondrion | 74.52 | 80.14 |
| Bra036038.1-P | Field mustard | cytosol, mitochondrion | 74.52 | 80.14 |
| CDY70622 | Canola | cytosol, mitochondrion | 74.52 | 80.14 |
| Zm00001d005753_P001 | Maize | mitochondrion | 63.69 | 80.0 |
| Zm00001d040875_P001 | Maize | mitochondrion | 63.69 | 80.0 |
| Bra012916.1-P | Field mustard | cytosol, mitochondrion | 73.89 | 79.45 |
| CDY17740 | Canola | extracellular | 73.89 | 79.45 |
| Zm00001d032087_P001 | Maize | mitochondrion | 63.06 | 79.2 |
| CDX68557 | Canola | cytosol, mitochondrion | 66.88 | 78.95 |
| CDY23029 | Canola | cytosol, mitochondrion | 66.88 | 78.95 |
| CDY30618 | Canola | cytosol, mitochondrion | 66.24 | 78.2 |
| AT5G67510.1 | Thale cress | cytosol, plastid | 71.97 | 77.4 |
| Zm00001d004528_P001 | Maize | plastid | 40.76 | 72.73 |
| GSMUA_Achr10P... | Banana | cytosol | 84.08 | 67.35 |
| KRH17569 | Soybean | mitochondrion | 50.32 | 65.29 |
| KRH00041 | Soybean | nucleus | 57.32 | 63.83 |
| Zm00001d049904_P001 | Maize | plastid | 66.24 | 63.8 |
| VIT_01s0010g03220.t01 | Wine grape | cytosol | 21.66 | 61.82 |
| KRH57594 | Soybean | mitochondrion | 36.94 | 57.43 |
| Os01t0140500-01 | Rice | plasma membrane | 43.31 | 52.71 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 49.68 | 36.97 |
Protein Annotations
| MapMan:17.1.2.1.26 | Gene3D:2.30.30.30 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 | InterPro:IPR014722 |
| InterPro:KOW | HAMAP:MF_01326_A | PFAM:PF00467 | PFAM:PF16906 | ScanProsite:PS01108 | PANTHER:PTHR11143 |
| PANTHER:PTHR11143:SF13 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L24/26_CS | InterPro:Ribosomal_L26/L24P_euk/arc | SMART:SM00739 | SUPFAM:SSF50104 |
| TIGRFAMs:TIGR01080 | EnsemblPlantsGene:TraesCS3D01G140800 | EnsemblPlants:TraesCS3D01G140800.1 | InterPro:Translation_prot_SH3-like_sf | TIGR:cd06089 | SEG:seg |
Description
No Description!
Coordinates
chr3D:-:102791705..102792178
Molecular Weight (calculated)
17544.3 Da
IEP (calculated)
11.710
GRAVY (calculated)
-0.643
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MKRNPRVTSS RRKCRKAHFT APSSVRRVLM SAALSSELRH KYNVRSIPIR KDDEVQVVRG TYKGREGKVV QVYRRRWVIH VERITREKVN GSTVNVGIHP
101: SKVIVTKLKL DKDRKALLDR KARGRAADKA KGKFTAEDVA AAAGGATATG ASLQEID
101: SKVIVTKLKL DKDRKALLDR KARGRAADKA KGKFTAEDVA AAAGGATATG ASLQEID
001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
Arabidopsis Description
RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.