Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0010g03220.t01 | Wine grape | cytosol | 45.45 | 54.55 |
| Zm00001d004528_P001 | Maize | plastid | 68.18 | 51.14 |
| Zm00001d005753_P001 | Maize | mitochondrion | 86.36 | 45.6 |
| Zm00001d040875_P001 | Maize | mitochondrion | 86.36 | 45.6 |
| Zm00001d032087_P001 | Maize | mitochondrion | 86.36 | 45.6 |
| Os12t0150100-01 | Rice | golgi, plasma membrane, plastid | 87.88 | 38.67 |
| Zm00001d039908_P001 | Maize | plastid | 90.91 | 38.22 |
| Zm00001d008594_P001 | Maize | mitochondrion | 89.39 | 37.58 |
| EES02512 | Sorghum | mitochondrion | 89.39 | 37.58 |
| Os11t0151300-01 | Rice | nucleus, plasma membrane, plastid | 86.36 | 37.25 |
| KRH28357 | Soybean | cytosol, mitochondrion | 81.82 | 36.99 |
| KRH77124 | Soybean | mitochondrion | 81.82 | 36.99 |
| TraesCS3D01G140800.1 | Wheat | golgi, unclear | 87.88 | 36.94 |
| HORVU3Hr1G026880.1 | Barley | mitochondrion, plastid | 87.88 | 36.94 |
| TraesCS3B01G158400.1 | Wheat | mitochondrion, plastid | 87.88 | 36.94 |
| TraesCS3A01G313500.1 | Wheat | nucleus | 86.36 | 36.31 |
| PGSC0003DMT400023405 | Potato | cytosol, mitochondrion | 78.79 | 35.62 |
| KRH10767 | Soybean | cytosol, mitochondrion | 78.79 | 35.62 |
| KRH21509 | Soybean | nucleus | 78.79 | 35.62 |
| Solyc03g044000.1.1 | Tomato | nucleus | 78.79 | 35.62 |
| Solyc02g092430.1.1 | Tomato | nucleus | 77.27 | 34.93 |
| PGSC0003DMT400055191 | Potato | cytosol, mitochondrion | 77.27 | 34.93 |
| PGSC0003DMT400085766 | Potato | cytosol, mitochondrion | 77.27 | 34.93 |
| Solyc02g064670.1.1 | Tomato | nucleus, unclear | 77.27 | 34.93 |
| KRH21559 | Soybean | nucleus | 77.27 | 34.93 |
| CDY70622 | Canola | cytosol, mitochondrion | 77.27 | 34.93 |
| CDY17740 | Canola | extracellular | 77.27 | 34.93 |
| CDY02104 | Canola | cytosol, mitochondrion | 77.27 | 34.93 |
| Bra036038.1-P | Field mustard | cytosol, mitochondrion | 77.27 | 34.93 |
| Bra029984.1-P | Field mustard | cytosol, mitochondrion | 77.27 | 34.93 |
| Bra012916.1-P | Field mustard | cytosol, mitochondrion | 77.27 | 34.93 |
| AT3G49910.1 | Thale cress | cytosol, mitochondrion | 77.27 | 34.93 |
| Zm00001d049904_P001 | Maize | plastid | 84.85 | 34.36 |
| GSMUA_Achr3P01440_001 | Banana | mitochondrion | 78.79 | 33.99 |
| AT5G67510.1 | Thale cress | cytosol, plastid | 74.24 | 33.56 |
| KRH00041 | Soybean | nucleus | 71.21 | 33.33 |
| GSMUA_Achr8P18300_001 | Banana | mitochondrion | 77.27 | 33.33 |
| GSMUA_Achr6P09860_001 | Banana | mitochondrion | 80.3 | 33.33 |
| CDY23029 | Canola | cytosol, mitochondrion | 60.61 | 30.08 |
| CDX68557 | Canola | cytosol, mitochondrion | 60.61 | 30.08 |
| CDY30618 | Canola | cytosol, mitochondrion | 59.09 | 29.32 |
| Os01t0140500-01 | Rice | plasma membrane | 51.52 | 26.36 |
| GSMUA_Achr10P... | Banana | cytosol | 77.27 | 26.02 |
| KRH17569 | Soybean | mitochondrion | 43.94 | 23.97 |
| KRH57594 | Soybean | mitochondrion | 34.85 | 22.77 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 50.0 | 15.64 |
Protein Annotations
| MapMan:17.1.2.1.26 | Gene3D:2.30.30.30 | UniProt:A0A1D6MVM2 | GO:GO:0003674 | GO:GO:0003735 | GO:GO:0005198 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 |
| InterPro:IPR014722 | InterPro:KOW | ProteinID:ONM32858.1 | PFAM:PF00467 | PFAM:PF16906 | PANTHER:PTHR11143 |
| PANTHER:PTHR11143:SF13 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L26/L24P_euk/arc | SMART:SM00739 | SUPFAM:SSF50104 | TIGRFAMs:TIGR01080 |
| InterPro:Translation_prot_SH3-like_sf | UniParc:UPI000843A52B | EnsemblPlantsGene:Zm00001d041360 | EnsemblPlants:Zm00001d041360_P001 | EnsemblPlants:Zm00001d041360_T001 | : |
Description
60S ribosomal protein L26-1
Coordinates
chr3:+:114208682..114208882
Molecular Weight (calculated)
7651.3 Da
IEP (calculated)
10.530
GRAVY (calculated)
-0.661
Length
66 amino acids
Sequence
(BLAST)
(BLAST)
1: MSAGLSTELR HKYNVCSIPI RKDDEVQVVR GTYKGHEGKM VQVYRRRWVI HVERITREKV NGSVPG
001: MKYNPRVTSS RRKNRKAHFT ASSSERRVIM SSPLSTDLRQ KYNVRSMPIR KDDEVQIVRG TYKGREGKVV QVYRRKWVIH IERITREKVN GTTVNVGIQP
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
101: SKVVITKLRL DKDRKSLLER KAKGRAAADK EKGTKFTSED VMQNVD
Arabidopsis Description
RPL26A60S ribosomal protein L26-1 [Source:UniProtKB/Swiss-Prot;Acc:P51414]
SUBAcon: [mitochondrion,cytosol]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.