Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0129g00090.t01 | Wine grape | cytosol, mitochondrion | 86.3 | 86.3 |
| VIT_07s0129g00160.t01 | Wine grape | cytosol, mitochondrion | 86.3 | 86.3 |
| AT3G49910.1 | Thale cress | cytosol, mitochondrion | 85.62 | 85.62 |
| KRH28357 | Soybean | cytosol, mitochondrion | 84.93 | 84.93 |
| KRH77124 | Soybean | mitochondrion | 84.25 | 84.25 |
| Solyc03g044000.1.1 | Tomato | nucleus | 83.56 | 83.56 |
| PGSC0003DMT400023405 | Potato | cytosol, mitochondrion | 83.56 | 83.56 |
| KRH10767 | Soybean | cytosol, mitochondrion | 81.51 | 81.51 |
| KRH21509 | Soybean | nucleus | 80.82 | 80.82 |
| KRH21559 | Soybean | nucleus | 80.82 | 80.82 |
| PGSC0003DMT400055191 | Potato | cytosol, mitochondrion | 80.14 | 80.14 |
| Solyc02g092430.1.1 | Tomato | nucleus | 79.45 | 79.45 |
| Solyc02g064670.1.1 | Tomato | nucleus, unclear | 79.45 | 79.45 |
| PGSC0003DMT400085766 | Potato | cytosol, mitochondrion | 78.77 | 78.77 |
| GSMUA_Achr3P01440_001 | Banana | mitochondrion | 81.51 | 77.78 |
| GSMUA_Achr8P18300_001 | Banana | mitochondrion | 81.51 | 77.78 |
| GSMUA_Achr6P09860_001 | Banana | mitochondrion | 81.51 | 74.84 |
| Zm00001d041360_P001 | Maize | cytosol | 33.56 | 74.24 |
| Os12t0150100-01 | Rice | golgi, plasma membrane, plastid | 76.03 | 74.0 |
| TraesCS3A01G313500.1 | Wheat | nucleus | 78.08 | 72.61 |
| TraesCS3D01G140800.1 | Wheat | golgi, unclear | 77.4 | 71.97 |
| Zm00001d008594_P001 | Maize | mitochondrion | 77.4 | 71.97 |
| HORVU3Hr1G026880.1 | Barley | mitochondrion, plastid | 77.4 | 71.97 |
| TraesCS3B01G158400.1 | Wheat | mitochondrion, plastid | 77.4 | 71.97 |
| Os11t0151300-01 | Rice | nucleus, plasma membrane, plastid | 75.34 | 71.9 |
| Zm00001d039908_P001 | Maize | plastid | 76.71 | 71.34 |
| EES02512 | Sorghum | mitochondrion | 76.03 | 70.7 |
| KRH17569 | Soybean | mitochondrion | 57.53 | 69.42 |
| Zm00001d005753_P001 | Maize | mitochondrion | 56.85 | 66.4 |
| KRH57594 | Soybean | mitochondrion | 45.89 | 66.34 |
| Zm00001d040875_P001 | Maize | mitochondrion | 55.48 | 64.8 |
| Zm00001d032087_P001 | Maize | mitochondrion | 54.79 | 64.0 |
| Zm00001d004528_P001 | Maize | plastid | 37.67 | 62.5 |
| KRH00041 | Soybean | nucleus | 59.59 | 61.7 |
| GSMUA_Achr10P... | Banana | cytosol | 80.82 | 60.2 |
| Zm00001d049904_P001 | Maize | plastid | 59.59 | 53.37 |
| Os01t0140500-01 | Rice | plasma membrane | 39.04 | 44.19 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, nucleus, plastid | 53.42 | 36.97 |
Protein Annotations
| MapMan:17.1.2.1.26 | Gene3D:2.30.30.30 | EntrezGene:836887 | ProteinID:AED98354.1 | ArrayExpress:AT5G67510 | EnsemblPlantsGene:AT5G67510 |
| RefSeq:AT5G67510 | TAIR:AT5G67510 | RefSeq:AT5G67510-TAIR-G | EnsemblPlants:AT5G67510.1 | TAIR:AT5G67510.1 | EMBL:AY065109 |
| EMBL:AY081628 | EMBL:AY086530 | ProteinID:BAB08459.1 | GO:GO:0002181 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003723 | GO:GO:0003735 | GO:GO:0005198 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0005840 | GO:GO:0006412 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015934 | GO:GO:0019538 |
| GO:GO:0022625 | GO:GO:0022626 | GO:GO:0030529 | GO:GO:0042273 | GO:GO:0042788 | InterPro:IPR014722 |
| InterPro:KOW | RefSeq:NP_201552.1 | PFAM:PF00467 | PFAM:PF16906 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | ScanProsite:PS01108 | PANTHER:PTHR11143 |
| PANTHER:PTHR11143:SF13 | UniProt:Q9FJX2 | InterPro:Rib_L2_dom2 | InterPro:Ribosomal_L24/26_CS | InterPro:Ribosomal_L26/L24P_euk/arc | SMART:SM00739 |
| SUPFAM:SSF50104 | TIGRFAMs:TIGR01080 | InterPro:Translation_prot_SH3-like_sf | UniParc:UPI0000132F7B | SEG:seg | : |
Description
RPL26B60S ribosomal protein L26-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJX2]
Coordinates
chr5:-:26937621..26938498
Molecular Weight (calculated)
16791.4 Da
IEP (calculated)
11.736
GRAVY (calculated)
-0.876
Length
146 amino acids
Sequence
(BLAST)
(BLAST)
001: MKFNPRVSSS RRKNRKAHFT APSSVRRVLM SSPLSKDLRN KHNVRSMPIR KDDEVQVVRG TFKGREGKVM QVYRRKWVIH IERITREKVN GSTVNVGVNA
101: SNVMITKLRL DKDRKSLLER KANGRAAADK EKGTKFSAED VMENVD
101: SNVMITKLRL DKDRKSLLER KANGRAAADK EKGTKFSAED VMENVD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.